| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3642 |
|---|
| Symbol | |
|---|
| ID | 4254206 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 4353146 |
|---|
| End bp | 4353757 |
|---|
| Gene Length | 612 bp |
|---|
| Protein Length | 203 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 638120285 |
|---|
| Product | DSBA oxidoreductase |
|---|
| Protein accession | YP_735763 |
|---|
| Protein GI | 113971970 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.190488 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAG CATTACTTAT GGCAGCAGCG CTGTTATTGG CTCCACTAAC TGTGTCGGCA
GTTGAATACA AAGAAGGTGT ACATTACACA GTGATTAACG ATGGTCCAGC AACGGCTAAG
CCTGAAATCA CCGAGTTTTT CTCTTTCTAT TGCCCGCATT GCTTCAACTT CTCAAAAACT
GTGGTACCTA AAATTTTGGC TGAGAAGCCA GAAGGTGTGG CATTCAATCA AGCCCACGTT
GACTTTATCG GTAAAGAAAT GGGCGTAGAA ATGTCACGCG CCTTTGCTGT GGCACACCAA
CTCAATGTGG ATGAAAAAAT GGATGCGGCG ATATTTTCAG CTATCCATGA GAAGAAACAA
CATTTCACTA ACCGTGACGA CGTGCGCGCC CTGTTTGTGG CAAACGGCGT TGACGGAAAA
GCTTTCGATG CCGCTGCAGA TTCATTTATG GTGAAAGCGC AAATGGCGAA AATGAAGCGT
GATACTGAAA ACGCGAAGAT TTCTGGCGTG CCTGCGTTAG TGGTGAATGG TAAGTACCGC
GTCGAAACGG GTGCGATCAA GTCTTACGAC GAGCTATTAG ATATCGCTTA CTATTTAGCC
AAGAAACAAT AA
|
|---|
| Protein sequence | MKKALLMAAA LLLAPLTVSA VEYKEGVHYT VINDGPATAK PEITEFFSFY CPHCFNFSKT
VVPKILAEKP EGVAFNQAHV DFIGKEMGVE MSRAFAVAHQ LNVDEKMDAA IFSAIHEKKQ
HFTNRDDVRA LFVANGVDGK AFDAAADSFM VKAQMAKMKR DTENAKISGV PALVVNGKYR
VETGAIKSYD ELLDIAYYLA KKQ
|
|---|
| |