Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3621 |
Symbol | |
ID | 4254185 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 4329013 |
End bp | 4329609 |
Gene Length | 597 bp |
Protein Length | 198 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638120264 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_735742 |
Protein GI | 113971949 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACATTC TTCTCGCGGA AGATCAGGCC ATGGTGCGCG GCGCGCTCGC AGCACTGTTA ACCCTAGCGG GCGGTTTCAC CATTACCCAA GCCAGCAATG GCGATGAAGC CTTAAACCTG CTGAAACAAC AACATTTCGA TCTACTGCTG ACGGATATCG AAATGCCGGG AAGAACAGGT TTGGAGTTGG CAACTTGGCT TAAAGAACAG CATAGCCATA CCAAAGTTGT TGTTATTACC ACCTTTGGCC GCGCAGGTTA TATTAAACGC GCCATTGAAG CAGGCGTGGG TGGCTTTTTA CTGAAAGATG CGCCCTCGGA AACCTTAGTC CATGCCATTC AACAAGTGAT TGCGGGTAAG CGGATTATCG ATCCTGAGCT GGCAATCATG GCGATTGGCG ATGTCGACCC TCTCAATGAT AAAGAGCGCC GCGCCCTACG TTTTGCCAGT GAAGGTAAAT CCACCGCCGA GATAGCCGAG ATGCTGTTTA TTGCCGAAGG CACGGTACGT AACTATCTAT CCGAAGCCAT TGCCAAACTC AATGCGAGCA ACCGAATCGA TGCCGCCCGC ATCGCCAAGC AAAAAGGTTG GTTATAG
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Protein sequence | MHILLAEDQA MVRGALAALL TLAGGFTITQ ASNGDEALNL LKQQHFDLLL TDIEMPGRTG LELATWLKEQ HSHTKVVVIT TFGRAGYIKR AIEAGVGGFL LKDAPSETLV HAIQQVIAGK RIIDPELAIM AIGDVDPLND KERRALRFAS EGKSTAEIAE MLFIAEGTVR NYLSEAIAKL NASNRIDAAR IAKQKGWL
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