Gene Shewmr4_3599 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3599 
Symboldut 
ID4254163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4305363 
End bp4305821 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content52% 
IMG OID638120242 
Productdeoxyuridine 5'-triphosphate nucleotidohydrolase 
Protein accessionYP_735720 
Protein GI113971927 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0756] dUTPase 
TIGRFAM ID[TIGR00576] deoxyuridine 5'-triphosphate nucleotidohydrolase (dut) 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.775614 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC CGATTGAATT AAAGATCCTC GACTCCCGTA TTGGCTCTGA GTTTCCCCTG 
CCCGCCTATG CCACTCCAGG CAGCGCGGGA ATGGATCTTC GCGCCATGAT TGATACCACA
ATGACGATAG CCCCGGGTGA GACTCAGTTA ATCCCGACGG GCATCGCCAT CCACGTGGCA
GACCCAGGCC TTGCCGCCGT GATCCTGCCC CGTTCAGGCC TTGGCCATAA ACACGGTATC
GTACTCGGAA ATCTGGTTGG GCTTATCGAT TCAGATTATC AAGGTCCCTT GATGGTCTCT
TGCTGGAACC GCAGCGATAC CCCATTTACT TTAGAAATTG GTGATCGTCT CGCACAACTG
GTGTTTGTTC CTGTGGTACA AGCACAATTC AAACTCGTTG ATGAGTTCGA CAGCTCAGAT
CGTGGTGAAG GTGGATTTGG CCATTCTGGC ACTAAATAA
 
Protein sequence
MKTPIELKIL DSRIGSEFPL PAYATPGSAG MDLRAMIDTT MTIAPGETQL IPTGIAIHVA 
DPGLAAVILP RSGLGHKHGI VLGNLVGLID SDYQGPLMVS CWNRSDTPFT LEIGDRLAQL
VFVPVVQAQF KLVDEFDSSD RGEGGFGHSG TK