| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3587 |
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| Symbol | |
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| ID | 4254151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4291839 |
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| End bp | 4292933 |
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| Gene Length | 1095 bp |
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| Protein Length | 364 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638120230 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_735708 |
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| Protein GI | 113971915 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTATC AAATTGCAGT ATTAGCCGGG GATGGTATTG GGCCAGAAGT GATGGCCGAG
GCGCGTAAGG TGTTAAAGGC GGTTGAGGCG CGTTTTGGCC TTAACATTGA ATACACTGAA
TATGATGTCG GCGGTATCGC CATTGACAAT CATGGTTGTC CTTTGCCTGA GGCAACACTG
AAGGGCTGCG AGGCGGCCGA TGCCATTCTG TTCGGTTCAG TCGGTGGTCC TAAATGGGAA
AAACTGCCGC CCAATGAACA ACCCGAGCGT GGTGCTCTGT TGCCGCTACG GGGTCACTTC
GAACTGTTTT GTAACCTGCG TCCCGCTAAA TTGCATGATG GTTTAGAACA TATGTCACCG
CTGCGCAGCG ATATTTCAGC TAGAGGCTTC GATGTTCTCT GCGTGCGTGA GTTAACGGGT
GGGATCTACT TTGGTAAACC TAAGGGTCGC CAAGGTGAAG GTGAGAGTGA AGAAGCCTTC
GATACCATGC GTTACAGCCG CCGTGAGATT GCCCGTATCG CCCGCATCGC CTTTGAAGCC
GCCCGCGGCC GCCGTAAAAA AGTCACTTCG GTCGACAAGG CAAACGTTTT AGCTTGCTCG
GTACTGTGGC GCCAAGTGGT AGAAGAAGTG GCGGTGGACT TCCCCGATGT TAAACTGGAA
CACATCTATA TCGACAACGC GACCATGCAG TTGCTGCGCC GCCCCGATGA GTTTGACGTG
ATGCTGTGCT CTAACTTGTT TGGCGACATT CTATCGGATG AAATCGCCAT GTTGACAGGC
TCCATGGGCT TGTTGTCTTC GGCGAGTATG AATAGCACTG GCTTTGGTTT GTTTGAACCC
GCTGGTGGTA GCGCGCCGGA TATCGCGGGT AAGGGCATCG CTAACCCGAT TGCACAAATT
CTGTCGGCGG CACTAATGCT GCGCCACAGC TTAAAGCAAG AAGAGGCGGC AAGCGCGATC
GAACGTGCAG TGAGTAAAGC GCTGAATTCT GGTTATTTAA CTGGTGAGCT ATTAAGTAGC
GACCAACGCC ATAAGGCCAA ATCGACAGTC GAAATGGGCG ACTTTATCGC CGATGCAGTT
AAGGCAGGTG TGTAA
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| Protein sequence | MSYQIAVLAG DGIGPEVMAE ARKVLKAVEA RFGLNIEYTE YDVGGIAIDN HGCPLPEATL
KGCEAADAIL FGSVGGPKWE KLPPNEQPER GALLPLRGHF ELFCNLRPAK LHDGLEHMSP
LRSDISARGF DVLCVRELTG GIYFGKPKGR QGEGESEEAF DTMRYSRREI ARIARIAFEA
ARGRRKKVTS VDKANVLACS VLWRQVVEEV AVDFPDVKLE HIYIDNATMQ LLRRPDEFDV
MLCSNLFGDI LSDEIAMLTG SMGLLSSASM NSTGFGLFEP AGGSAPDIAG KGIANPIAQI
LSAALMLRHS LKQEEAASAI ERAVSKALNS GYLTGELLSS DQRHKAKSTV EMGDFIADAV
KAGV
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