| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3586 |
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| Symbol | |
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| ID | 4254150 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4290415 |
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| End bp | 4291839 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638120229 |
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| Product | isopropylmalate isomerase large subunit |
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| Protein accession | YP_735707 |
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| Protein GI | 113971914 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0065] 3-isopropylmalate dehydratase large subunit |
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| TIGRFAM ID | [TIGR00170] 3-isopropylmalate dehydratase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACTC CTTCAACATC AACCGCTCCG AAAACCCTGT ATCAAAAAGT GTGGGATGCT
CACGTTGTGG CCACCCCTGA GGGCGAAGCG CCGATCATTT ATGTCGACAG ACATTTGGTT
CACGAAGTGA CATCACCCCA AGCCTTTAGC GGCTTGAAAG TGGCGGGGCG TAAGTTACGC
GCCCCAGAAA AAACCTTCGC GACCATGGAT CACAACACAT CAACACGCAG TGCCAGTCTC
GATGCCTTAA GCCCTATGGC ACGCACTCAG GTCGAGACCT TGGCACAAAA CTGTAAAGAC
TTCGGCGTGC GCTTATATGA CATTCATCAT CCTAATCAAG GGATTGTGCA TGTGATGGGA
CCTGAGCTTG GCATTACCTT ACCCGGCACT GTCATAGTGT GTGGTGATTC CCATACGGCG
ACTCACGGGG CCTTTGGCGC CCTGGCTTTC GGTATCGGCA CTTCCGAAGT GGAACATGTA
CTGGCGACGC AAACCCTGCG CCAATTAAAA GCCAAGACCA TGAAAATCGA AGTTCGTGGT
CAGGTCACCG ATGGTGTCAC CGCGAAAGAT ATCGTACTGG CGATTATCGG TAAGATCGGC
ATGGATGGCG GCACTGGCTA TGTAGTTGAG TTTTGTGGTG AGGCCATTGA AGCACTGTCG
ATGGAAGGGC GCATGACTGT CTGCAATATG GCGATTGAAA TGGGCGCTAA GGCGGGCATG
GTTGCGCCGG ATCAAACCAC TTTCGATTAC CTAGAAGGTC GTGAGTTTGC ACCAAAGGGC
GAAGATTGGG CAGAGGCCGT CGCCGCCTGG AAGGCGCTGA AAACCGATGT TGGTGCTGAG
TTTGATGCCT CCGTCGTGTT GGATGCGGCC GATATCGCAC CGCAATTGAC TTGGGGCACC
AACCCTGGAC AAGTGGTTGC CATCGATGCG CCAGTGCCTA ATCCTGCCGA TGAGGCAAAT
CCAACGATTC GCGCTAGCAT GGAAAAAGCG CTGGATTATA TCGGCTTGAC CGCAGGCACG
CCGATGACAG ACGTCGCGAT TAATAAAGTC TTTATTGGTT CTTGCACTAA CTCGCGGATT
GAAGATTTAC GCAGCGCGGC GAAACAGGCC AAAGGGCGTA AAGTGGCGTC GGGCGTTACG
GCAATCGTAG TACCGGGCTC TGGCCAAGTG AAGGCGCAGG CCGAGGCCGA AGGTTTAGAT
AAAATCTTTA TCGAGGCCGG ATTCGAATGG CGTTTACCGG GCTGCTCTAT GTGTTTGGCG
ATGAACGATG ACAGGTTAGA AGCGGGCGAT CGCTGCGCCT CGACCAGTAA TCGTAACTTC
GAAGGGCGCC AAGGCCGTGG TAGTCGTACT CATTTAGTGA GTCCAGCGAT GGCGGCTGCG
GCGGCAATTG CAGGGCATTT TGTCGATATC CGTAAACCTT ACTAA
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| Protein sequence | MTTPSTSTAP KTLYQKVWDA HVVATPEGEA PIIYVDRHLV HEVTSPQAFS GLKVAGRKLR
APEKTFATMD HNTSTRSASL DALSPMARTQ VETLAQNCKD FGVRLYDIHH PNQGIVHVMG
PELGITLPGT VIVCGDSHTA THGAFGALAF GIGTSEVEHV LATQTLRQLK AKTMKIEVRG
QVTDGVTAKD IVLAIIGKIG MDGGTGYVVE FCGEAIEALS MEGRMTVCNM AIEMGAKAGM
VAPDQTTFDY LEGREFAPKG EDWAEAVAAW KALKTDVGAE FDASVVLDAA DIAPQLTWGT
NPGQVVAIDA PVPNPADEAN PTIRASMEKA LDYIGLTAGT PMTDVAINKV FIGSCTNSRI
EDLRSAAKQA KGRKVASGVT AIVVPGSGQV KAQAEAEGLD KIFIEAGFEW RLPGCSMCLA
MNDDRLEAGD RCASTSNRNF EGRQGRGSRT HLVSPAMAAA AAIAGHFVDI RKPY
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