| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3575 |
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| Symbol | murE |
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| ID | 4254139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4278453 |
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| End bp | 4279934 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638120218 |
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| Product | UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase |
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| Protein accession | YP_735696 |
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| Protein GI | 113971903 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0769] UDP-N-acetylmuramyl tripeptide synthase |
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| TIGRFAM ID | [TIGR01085] UDP-N-acetylmuramyl-tripeptide synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00584148 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGTTGT TAAGGGATCT ATTAGCGCCT TGGTTCCCCT ACGCGGGCGA ACAAACCTTC
TTAGATTTGA CTTTAGATAG CCGCGCAATA CGTCGCGGCG ATGTGTTTTT AGCGCTGCCT
GGCCATAAGG TCGATGGTCG TCAATTTATC GATAAGGCCT TAGCCCAAGG TGCGATTGCG
GTGTTAGTGC ATACGGATAG CATTGAAGAG CAGGGCAAGG TTATTGCGAC TGAGCAAGGC
GTACAGATTT ATTTTTATCA GTTAGCGAAG CAAGTGTCTG CGGTCGCCGC AGTGCGTTAT
CCCGTTGTCC AAGGTCAGTC TATGGGCATT GTCGGGATCA CCGGCACCAA TGGTAAAACC
TCGACTAGTC AACTGTGCGC GCAATTAGTG ACCTTGCTTG AAGGTAAAGC GGCGGTGATG
GGCACGCTCG GCAATGGCCT GTGGGGCGAG TTAGTCGATA GCGGTAATAC GACCGCCGAT
GCGATTACCC TGATGCGCCA ACTATATGAG TTTGCAGACA AAGGCGTTAA TACCTGCGCG
ATGGAAGTCT CAAGTCATGG TTTAGTCCAA GGCCGAGTCG ATGCCGTGCC CTTCGATGTG
GCGGTATTCA CTAACCTGAC CCGTGATCAC TTGGACTACC ACGGCGATAT GGAAAACTAT
GCCGCAGCCA AGCAAATGCT GTTTCGTTTC GACGCCCTGC GTCACGGCTT AGTGAATCTT
GATGATCCCG TGGGTGCCGC TTGGTTATCC GAGCTGGCAA ATGTCCCCGC GAAAATGTGG
GGCTTTAGTA TTGAAGCGCA TACCGAGGCG GCGTTTTACA CTAAGAATGC CCAATTTAAC
GATCAAGGCG TGCAGGCGAA ATTAGTCTGG CCCGAGGGCG AAATCGACAT TCGTTCTCCT
TTATTAGGTG CCTTTAATCT CTCGAATTTA CTCGCTGCTT TATCTGCCTT GTATTTACAG
GGCGTGGATA TGCGTGCCCT GGCCGCCAAA GTGCCTTATT TAGTGCCCGT GGCTGGCCGC
ATGGAACGTT TTACCACCGC AGACAACATC ACCTTAGTCG TCGATTATGC TCACACCCCG
GATGCGATTG AACAGGCGCT GAATGCCCTG CGTCGTCACT GCGCGGGCGA GTTGTGGTGC
GTGTTTGGCT GCGGTGGCGA CCGTGATAAG GGCAAACGCC CATTGATGGG ACAAGCGGCG
GAGCAATGCG CCGATCGCAT TATGGTGACT AGCGATAATG CCCGTAGCGA AGATCCTAAC
CAAATTATTA CCGATATTAT CCAAGGGCTG ACTCACCCTG AGCGAGCATT GACCGAGGTT
GACCGTGTGG CTGCGATTAA GCGCGTCGTG GCACAGGCTA AACCTGGGGA TGTGATTCTG
CTTGCGGGCA AAGGCCATGA AACTTACCAA GAGGCGGCAG GTGTGCGTCA TGACTATGAT
GAGCGCGCCC TGGCACGTCA GTTATCGGAG CAAAGCCAAT GA
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| Protein sequence | MMLLRDLLAP WFPYAGEQTF LDLTLDSRAI RRGDVFLALP GHKVDGRQFI DKALAQGAIA
VLVHTDSIEE QGKVIATEQG VQIYFYQLAK QVSAVAAVRY PVVQGQSMGI VGITGTNGKT
STSQLCAQLV TLLEGKAAVM GTLGNGLWGE LVDSGNTTAD AITLMRQLYE FADKGVNTCA
MEVSSHGLVQ GRVDAVPFDV AVFTNLTRDH LDYHGDMENY AAAKQMLFRF DALRHGLVNL
DDPVGAAWLS ELANVPAKMW GFSIEAHTEA AFYTKNAQFN DQGVQAKLVW PEGEIDIRSP
LLGAFNLSNL LAALSALYLQ GVDMRALAAK VPYLVPVAGR MERFTTADNI TLVVDYAHTP
DAIEQALNAL RRHCAGELWC VFGCGGDRDK GKRPLMGQAA EQCADRIMVT SDNARSEDPN
QIITDIIQGL THPERALTEV DRVAAIKRVV AQAKPGDVIL LAGKGHETYQ EAAGVRHDYD
ERALARQLSE QSQ
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