Gene Shewmr4_3563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3563 
Symbol 
ID4254128 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4265086 
End bp4265985 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content47% 
IMG OID638120207 
Productpeptidase M23B 
Protein accessionYP_735685 
Protein GI113971892 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000153251 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000453788 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGTGTAA CAGTATTTAT TCAAGGTCGG AATGGCGTCA CGCGCTGGCA ACCCAGTAAA 
CGCTGGTTGC TCCTTCCCAT GCTATTGTTG GCTACTGGTG CCGGTATTTA TCAACACAAC
TCTGCTAAAT TTGAAAATCA GCAAGCCAGT GTCGATAACG ATCGGATCCA ACGCGAACAA
CAAAAGAAGC AAGTCTTAGA ACTAAAGAGT GCAACAGAGT CACAGCTAGC CATGCTTGCG
ACCCATGTCG CGCGCATGCA AGCTAAAATC ACCCGTCTCG AGGCTTTAGG TCAACAAGTC
GCTAAACAAA ATAAATTGGA TGAAGACTTT GATTTCTCCT CTGAAGTGGG TGTGGGTGGC
TTGAGCGAAT TAGGCTCGAA TATCGAACTT GGTCAGCTTA TCGATGATAT GGATAAACTG
GCGTCACGAA TTGACAACAA TAATGTTCAA CTATCACTAC TTGAAACAGT GTCATCTAAC
CACCATATAG ATGCTGAACG TCATGTATCA GGGCTCCCAC TCGATAAAGG TTGGTTATCG
TCGCCCTACG GATTACGTAA TGACCCTTTT AACGGTCGTC GAACCATGCA TAAAGGGATC
GATTTTACCG GTCGAGAAGG GGCTAAAGTT GTCGCGACTG CTGCAGGCGT GGTGACTTGG
GCTGGGAATA TGTTTGGCTA TGGCGAATTG GTCGAAATCG ACCATGGTAA CGGTTTACGT
ACACGCTATG GTCATAATAA AGCTTTGTCA GTAGCTGTAG GTGATGTGGT CGCTAAAGGC
GAAACCATCG CCAGTATGGG AAGCACTGGG CGCTCAACAG GGGCTCATGT GCATTATGAA
GTGTTGCGTG GCGGACAGCA GATAGATCCA CAGAAGTTTG TCTACCGCAA GGCAGGTTAA
 
Protein sequence
MSVTVFIQGR NGVTRWQPSK RWLLLPMLLL ATGAGIYQHN SAKFENQQAS VDNDRIQREQ 
QKKQVLELKS ATESQLAMLA THVARMQAKI TRLEALGQQV AKQNKLDEDF DFSSEVGVGG
LSELGSNIEL GQLIDDMDKL ASRIDNNNVQ LSLLETVSSN HHIDAERHVS GLPLDKGWLS
SPYGLRNDPF NGRRTMHKGI DFTGREGAKV VATAAGVVTW AGNMFGYGEL VEIDHGNGLR
TRYGHNKALS VAVGDVVAKG ETIASMGSTG RSTGAHVHYE VLRGGQQIDP QKFVYRKAG