Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3563 |
Symbol | |
ID | 4254128 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4265086 |
End bp | 4265985 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638120207 |
Product | peptidase M23B |
Protein accession | YP_735685 |
Protein GI | 113971892 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000153251 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 3 |
Fosmid unclonability p-value | 0.0000000453788 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGTGTAA CAGTATTTAT TCAAGGTCGG AATGGCGTCA CGCGCTGGCA ACCCAGTAAA CGCTGGTTGC TCCTTCCCAT GCTATTGTTG GCTACTGGTG CCGGTATTTA TCAACACAAC TCTGCTAAAT TTGAAAATCA GCAAGCCAGT GTCGATAACG ATCGGATCCA ACGCGAACAA CAAAAGAAGC AAGTCTTAGA ACTAAAGAGT GCAACAGAGT CACAGCTAGC CATGCTTGCG ACCCATGTCG CGCGCATGCA AGCTAAAATC ACCCGTCTCG AGGCTTTAGG TCAACAAGTC GCTAAACAAA ATAAATTGGA TGAAGACTTT GATTTCTCCT CTGAAGTGGG TGTGGGTGGC TTGAGCGAAT TAGGCTCGAA TATCGAACTT GGTCAGCTTA TCGATGATAT GGATAAACTG GCGTCACGAA TTGACAACAA TAATGTTCAA CTATCACTAC TTGAAACAGT GTCATCTAAC CACCATATAG ATGCTGAACG TCATGTATCA GGGCTCCCAC TCGATAAAGG TTGGTTATCG TCGCCCTACG GATTACGTAA TGACCCTTTT AACGGTCGTC GAACCATGCA TAAAGGGATC GATTTTACCG GTCGAGAAGG GGCTAAAGTT GTCGCGACTG CTGCAGGCGT GGTGACTTGG GCTGGGAATA TGTTTGGCTA TGGCGAATTG GTCGAAATCG ACCATGGTAA CGGTTTACGT ACACGCTATG GTCATAATAA AGCTTTGTCA GTAGCTGTAG GTGATGTGGT CGCTAAAGGC GAAACCATCG CCAGTATGGG AAGCACTGGG CGCTCAACAG GGGCTCATGT GCATTATGAA GTGTTGCGTG GCGGACAGCA GATAGATCCA CAGAAGTTTG TCTACCGCAA GGCAGGTTAA
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Protein sequence | MSVTVFIQGR NGVTRWQPSK RWLLLPMLLL ATGAGIYQHN SAKFENQQAS VDNDRIQREQ QKKQVLELKS ATESQLAMLA THVARMQAKI TRLEALGQQV AKQNKLDEDF DFSSEVGVGG LSELGSNIEL GQLIDDMDKL ASRIDNNNVQ LSLLETVSSN HHIDAERHVS GLPLDKGWLS SPYGLRNDPF NGRRTMHKGI DFTGREGAKV VATAAGVVTW AGNMFGYGEL VEIDHGNGLR TRYGHNKALS VAVGDVVAKG ETIASMGSTG RSTGAHVHYE VLRGGQQIDP QKFVYRKAG
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