| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3520 |
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| Symbol | |
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| ID | 4254085 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 4208070 |
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| End bp | 4208675 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120157 |
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| Product | methylation site containing protein |
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| Protein accession | YP_735642 |
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| Protein GI | 113971849 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCGTC TACATACATC TAAAGGATTT ACCCTAATCG AATTGGTGGT GGTTATCATC
ATCTTAGGCA TTCTTGCCGT GGTCGCTGCG CCTCGCTTTA TAAATCTTAG CCAAGATGCC
CACAATGCAC GGGCAAAAGC CGCCTTCGCC GCTTTTACCT CTGGCGTAAA GCTGTATCAC
AGTTGTTGGC TTGCGGGTGG ACACTCGGGC TACACCCAAG ATCTTGCCTG TTATGGTGAT
GGCACTTTAG ACTCAACCAC CACTGGTTTT CCCTTAGGTA AAGACACAGA CAATGGCGGC
AATCAAGGCA CTCAATTACA AGGCGATTTC TGTGGTGAGT TATGGCAATC CTTACTCGAT
AATCAGGACT TTGTCCTCAC CTCACACACG AATTGGGAAC AGCAACAGGC GTCCGATATC
GACATAGTCT ACTGGTACGC TGGCGGCGCA ATAAGTGATC CTGACACTTA TTGTTACTTT
AACTATGTGT CGGATGATCG CCGTCTTGGC AGTGAGAATT GGGAGCTAAA ATACTATCCC
CTCCATGGCC GCACTGTTAT CGGTCGTTCC TCCTTTTCGA AATCTGAAAT ACCACCTTCC
CCCTAA
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| Protein sequence | MSRLHTSKGF TLIELVVVII ILGILAVVAA PRFINLSQDA HNARAKAAFA AFTSGVKLYH
SCWLAGGHSG YTQDLACYGD GTLDSTTTGF PLGKDTDNGG NQGTQLQGDF CGELWQSLLD
NQDFVLTSHT NWEQQQASDI DIVYWYAGGA ISDPDTYCYF NYVSDDRRLG SENWELKYYP
LHGRTVIGRS SFSKSEIPPS P
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