| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3507 |
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| Symbol | |
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| ID | 4254073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4192438 |
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| End bp | 4193613 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 638120145 |
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| Product | ornithine decarboxylase |
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| Protein accession | YP_735630 |
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| Protein GI | 113971837 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00021864 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAT TTCAATCTAT TGATGTTGCT GACTATTATG ATGCTGAAAC CTTCAAACGT
ATTGAAGAGT TTGCCAAAGA TAAAGCGACC CCGTTCGTGG TGATTGATAC CAGTATCATT
GCGAAACAAT ACGATGACAT GGTTAATAGT TTTCCTTATG CCGATGTTTA TTATGCAGTT
AAGGCAAACC CTGCGGCTGA GATCCTGACG TTATTGAAAA ACAAAGGGTC AAACTTCGAT
ATTGCGTCGA TTTATGAATT AGATATGGTC ACTAACGTGG GCGTAACGCC TGACCGCGTG
AGCTATGGCA ATACCATCAA AAAGCGTCAA GATGTGCGTG CATTTTATGA GCGTGGTGTG
CGTATGTATG CATCGGATTC TGAAGCTGAC TTACGTATGA TCGCCGAAGA AGCACCAGGT
TCACGCATTT ATGTGCGCAT CCTGACCGAA GGCACGGACA CCGCCGATTG GCCACTGTCT
CGTAAGTTTG GTTGCCAAAA TGAGATGGCT TATGAGCTGT TAGTTCTGGC GAAGGAATTA
GGCTTAGAGC CCTTTGGTAT TTCATTCCAC GTGGGTTCAC AGCAACGTGA TATCGGTGCT
TGGGATTCGG CGATTGGTAA AGTGAAGAGC ATCTTCGATC GTTTGCGTGA TGAGCACAAC
ATCGTCCTGA AGATGATCAA CATGGGTGGT GGCTTCCCAG CTAACTATAT CGACAAAACC
AATCAACTGG GTGTGTATGC TGAGCAAATC ACTCACTTCC TGAAGGAAGA TTTTGGTGAT
GATTTGCCAC AGATCATTCT GGAGCCGGGT CGCTCGCTGA TCTCTAACGC TGGTGTGTTG
GTGTCTGAGG TGGTGCTGAT CAGTAAGAAA TCCTACACCG CATTAGAGCG TTGGGTATTT
ACCGATGTGG GTAAGTTCTC TGGTTTAATC GAAACCATGG ATGAGGCGAT TAAATTCCCA
ATCTTCACCC ACAAACAAGG TGAGTTGGAC AAATGTGTTA TCGCCGGCCC GACCTGCGAT
AGCGCCGACA TCATGTACGA ACACTACAGC TATGGTCTGC CGAATGACCT CGCGATTGGA
GACCGTATGT ACTGGTTAAC CGCCGGTGCT TACACCACCA CTTATTCAGC GGTGTGCTTT
AACGGTTTCC CACCTCTGAA GGATTACTAC CTGTAA
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| Protein sequence | MSQFQSIDVA DYYDAETFKR IEEFAKDKAT PFVVIDTSII AKQYDDMVNS FPYADVYYAV
KANPAAEILT LLKNKGSNFD IASIYELDMV TNVGVTPDRV SYGNTIKKRQ DVRAFYERGV
RMYASDSEAD LRMIAEEAPG SRIYVRILTE GTDTADWPLS RKFGCQNEMA YELLVLAKEL
GLEPFGISFH VGSQQRDIGA WDSAIGKVKS IFDRLRDEHN IVLKMINMGG GFPANYIDKT
NQLGVYAEQI THFLKEDFGD DLPQIILEPG RSLISNAGVL VSEVVLISKK SYTALERWVF
TDVGKFSGLI ETMDEAIKFP IFTHKQGELD KCVIAGPTCD SADIMYEHYS YGLPNDLAIG
DRMYWLTAGA YTTTYSAVCF NGFPPLKDYY L
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