| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3502 |
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| Symbol | |
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| ID | 4254068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4188225 |
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| End bp | 4189160 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638120140 |
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| Product | SPFH domain-containing protein/band 7 family protein |
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| Protein accession | YP_735625 |
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| Protein GI | 113971832 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000309206 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGTGT TTACCTTAGT CATTTTATTT GTCTTGTTTA TTCTCTATAA GCTGATGTTG
ATAGTGCCGA TGCGTGAGGT GCATGTCATT GAGCGTTTGG GGAAATTCCG TACCGTACTG
CAACCGGGAT TCCACTTCTT AATCCCTTTC TTCGATCGCG TCGCATATAA ACACGATACC
CGTGAGCAAG TGCTCGATGT GCCGCCACAA AGCTGTATCT CAAAGGATAA CACCCAGCTT
GAAGTGGACG GCTTAGTGTA TCTCAAGGTC ATGGATGGCA AATTAGCGAG CTACGGTATT
GAAAACTATC GCAAAGCTGC CGTGAATTTG GCACAGACCA CTATGCGTTC TGAAATCGGT
AAGCTCACCC TCAGTGAGAC CTTTTCCGAG CGTGATCGCT TAAACGAATC CATAGTGCGC
GAGATTGATA AGGCGTCTGA GCCTTGGGGG ATCAAAGTGT TACGCTATGA GATCCGTAAT
ATCACGCCAT CGCGCCATGT AATCCATACC CTTGAAAAAC AAATGGAAGC CGAGCGCCGT
AAGCGCGCCG AAATCACCTT GGCCAATGCC GAAAAGGCCG CGATGATCAA TATGTCAGAG
GGTGAGCGCC AAGAGGCGAT TAACATTTCT GAAGGCCAAA AACAGAAGCG TATCAACGAA
GCTAAAGGTA CGGGGCAAGA GATTGCCATT ATCGCTAAAG CAAAGTCCGA AGGCATGGCG
ATGATTTCCC AAGCGTTAGC GGTCAATGGC GGTAACGATG CGATGAATAT GCTGTTAAAA
GAGCAGTTTA TTGCTCAGGT CGGGAAAATT CTCAACGATT CGCAAGTGTC GGTTGTCCCC
GCGGAAATGG CAAAACTCGA AGGATTCTTC GAAGGAATGG AACAAGTCAC CCAAACCGTG
GGTGGCCATA ATGCAACTAG CAAAGGAGCA CGCTAA
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| Protein sequence | MFVFTLVILF VLFILYKLML IVPMREVHVI ERLGKFRTVL QPGFHFLIPF FDRVAYKHDT
REQVLDVPPQ SCISKDNTQL EVDGLVYLKV MDGKLASYGI ENYRKAAVNL AQTTMRSEIG
KLTLSETFSE RDRLNESIVR EIDKASEPWG IKVLRYEIRN ITPSRHVIHT LEKQMEAERR
KRAEITLANA EKAAMINMSE GERQEAINIS EGQKQKRINE AKGTGQEIAI IAKAKSEGMA
MISQALAVNG GNDAMNMLLK EQFIAQVGKI LNDSQVSVVP AEMAKLEGFF EGMEQVTQTV
GGHNATSKGA R
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