| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3494 |
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| Symbol | |
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| ID | 4254060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4178500 |
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| End bp | 4179660 |
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| Gene Length | 1161 bp |
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| Protein Length | 386 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 638120132 |
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| Product | hypothetical protein |
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| Protein accession | YP_735617 |
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| Protein GI | 113971824 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03505] FimV N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAAAA TAGCGAAATC ATTAGGACTA TTCGCCTTAG TGTGTAGCGC TTGTGTGCAG
GCGCAAGTTT CCCATGTGAG TATCAATAGC CGCATGTTTG ATTTGGGCGC TTACCCCAAA
ATGCGTGTCA ATGTGATCAC TGATAATCAG GATATGACTC GGCTCGAATT TGTGGTGCAG
CAGTCCGGTG GTGAAGAAAA ACTCATGGCC GAGCAGCTTA ACCGTTTCTT GGTTTTGCTA
ACGGGCGTGG AAGATGTAAC GGATCCTAAA GCTCGGCTGT TAGTACGCGA ATACCGTGTC
GATCGTTGGT ATGAAGTGAA AAACCTGCCG CTGTTTGATA ACGCTTCCTC TGCGGCGTCT
TCAGTATCGC AAGCAAAAAC GGCGGTTGTG AAATCGAGTA AAGCGGCCAC AGCCGAGACA
AGTCAGCTGG TGGCAAGCTC TGCTAAAAGT GACAAAACCC CAGTTAAATC AACTAAGGTT
GTGCAAGAGG TGAATTTAGT CACCGCTGAA GCAGATGTTG TGCCCGTTGC TTCCGTTGTT
GTGGCTGCGG TGACAACAGA AGTTGCCGCT ACGCCTCGCG CCTCTGGATT TACCTTCCCT
GAGGATAAGT CTGATGTGAA AGCATCCTCC ACCTCGAGTT CGTCGGTAGT GGCATCTGCT
GAGGCTAAAG CAGAAATGGC TAAATCTGAG CCATCTAAAA CTGAAGCAGC TAAAGTTGAG
ATGTCTACAC CTGAACCGTC GACAACAGAA GTCGCGAGTG GACCTGCGGT TGCACAAGCG
TCTGCTGATC TGCCAAGAGT GGATAAGAGC AAAACTGCGA TTGATGCGCC CGAAGTTAAG
GCTGGCGAAG AAACTGCAAC TGAGGTTAAG ACGGTAAGTT CGACAAATGC TCAGTCAACA
AATTCGGGTG AGTGTATGTT GGATTATCAC AACGAGACCC TATGGCGCAT TGCCAATCGC
TATGCCCCTG AATGGAAAGT AAGTGTCTAT GGTGCCATGC TGGCGATCCA CGATGCTAAC
CCTAAGGCAT TTTCGAAGAA TCGAATTAAC GCGCTGAAGA AAGATGCCAC GCTTTATTGT
CCATCGGCTG AGATACTTGC CCGTTATCCC GAAGCGCAGG CGGCTAAGAC AAGTTTCGAG
GATAGAGAGG CGGGGAGATA A
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| Protein sequence | MTKIAKSLGL FALVCSACVQ AQVSHVSINS RMFDLGAYPK MRVNVITDNQ DMTRLEFVVQ
QSGGEEKLMA EQLNRFLVLL TGVEDVTDPK ARLLVREYRV DRWYEVKNLP LFDNASSAAS
SVSQAKTAVV KSSKAATAET SQLVASSAKS DKTPVKSTKV VQEVNLVTAE ADVVPVASVV
VAAVTTEVAA TPRASGFTFP EDKSDVKASS TSSSSVVASA EAKAEMAKSE PSKTEAAKVE
MSTPEPSTTE VASGPAVAQA SADLPRVDKS KTAIDAPEVK AGEETATEVK TVSSTNAQST
NSGECMLDYH NETLWRIANR YAPEWKVSVY GAMLAIHDAN PKAFSKNRIN ALKKDATLYC
PSAEILARYP EAQAAKTSFE DREAGR
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