| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3479 |
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| Symbol | |
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| ID | 4254045 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4162845 |
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| End bp | 4163354 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 638120117 |
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| Product | methylation site containing protein |
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| Protein accession | YP_735602 |
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| Protein GI | 113971809 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4970] Tfp pilus assembly protein FimT |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000294883 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAAA GACAACAAGG TTTTACCTTA ATTGAGTTAG TCGTAGTGAT CATTATCTTA
GGTATTCTTG CAGTCACAGC GGCGCCTAAG TTTATTAATC TTCAATCTGA TGCATACGCA
TCTACTTTGA ATGGTGTCAA AGCGTCTTTG CAAGGTGCTA ATTCGCTTGT TTATTCTAAG
GCGGCGATTC AGGGGGTTGA GAGTAAGGAT GAATCTAGCA TTATCATCGA TGATAAGGGT
AATTCTGATG CGACTGATGA TGTTAAAGTA AACGGTGTTT ATGGGTATCT GAAGCAAGCA
GCAGCTGATA TGGTGTTAGT CCTTGATTTA GATACTACTA ACGAGTGGAC TATTGTTGAT
GCGCCAACTG TCACAACGAC ACTTACATCT CCTGTGATTA TTCATCCTAA AAAGTTGACA
CCTTCAGATA CGGCAAAATG TTGGGTTGAA TACAAACAGG CAGATTCTAG TAATCCTCCT
AAATATCATG TTGAGTCATC TGGTTGTTAA
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| Protein sequence | MMKRQQGFTL IELVVVIIIL GILAVTAAPK FINLQSDAYA STLNGVKASL QGANSLVYSK
AAIQGVESKD ESSIIIDDKG NSDATDDVKV NGVYGYLKQA AADMVLVLDL DTTNEWTIVD
APTVTTTLTS PVIIHPKKLT PSDTAKCWVE YKQADSSNPP KYHVESSGC
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