Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3458 |
Symbol | |
ID | 4254024 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4136103 |
End bp | 4137434 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638120096 |
Product | amino acid permease-associated region |
Protein accession | YP_735581 |
Protein GI | 113971788 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCCAAC AAAATCCAGG CTTAAAGCAA AGCCTTAGTC TGTGGCAAGT GGTTGTGATG GGATTAGCCT ATCTCACGCC TATGGCCGTG TTTGACACCT TTGGCATTGT CTCCGAGATC ACCTCAGGCC ATGTGGCCAC TTCTTACCTG CTCGCGTTAG CGGGGATCCT GTTTACCGCC TTTAGCTACG GTCACTTAGT ACGTAAATAT CCCTATGCTG GCTCGGCCTA TACCTATGCG CAAAAAACCT TTAGCCCGAA TGTCGGCTTT ATGGTGGGCT GGTCATCGCT GCTCGATTAT ATGTTTATGC CGATGATCAA TATGTTGCTG GCAAAGATTT ACCTCACGGC CATGTTCCCT AACGTCGAAC CGTGGATTTT TATCTTTGGT TTAGTCGCTG TAATGACGGT ATTAAACCTG AGGGGCATAG ATTTAGTGGC CAATTTTAAT GGCGTTATCG TATTCGCCCA GATAGCCATT ATCTTAGTGT TTATCGGCCT AATGGCCCAC AGCCTGTCCC TTGGCGAAGG TGAAGGTGTG ATTGCCAGTG TGCGTCCATT CTATTCCGAA GAGATAAGCC TTGCGCCGCT GTTTACTGGC GCGACTATTC TGTGTTTCTC CTTCTTAGGT TTCGATGGCT TAAGTTCGTT GAGTGAAGAA ACCAAGGACG CTAAGCGAGT CATCCCCCGC GCTATCGTGC TGACGGCGCT GATTGGCGGC GTGATTTTTG TCAGCGTGTC CTATTTCTTA CAGCTGTTTT TCCCTGATAT TTCTCGCTTC CAGCAGTTAG ATGCTGTGCT GCCTGAGATA GCCCTGTATG TGGGTGGTAA TTTATTCCAG TCAGTGGTGC TGGTGGCCAC CACCATTGCG GTGTTGGCCT CGGGCATGGC CGCCCATGCG GGTGTGGCAC GTATTCTCTA CGTGATGGGT CGCGACAATA TGCTGCCCAA TAAAGGCTTT GGTTATATTC ACCCCAAATG GCGCACGCCG GCATTTAACG TGATTCTGGT GGGATTACTG GCGCTTTCGG CGGTGTCCTT CGATCTCGAA ATGGCACTGG CGCTCGTCAA CTTCGGGGCG CTGGTGGCCT TTACCTTTGT GAACCTGTCG GTAATAGTGC AGTTTTATAT TAAAGAGAAA CGCAACCAAT CCTTGAAAGA CCACTTTCAA TACTTCGTCT TACCCTTGTG CGGCGCGGCG ACTATTGGTG TGCTGTGGCT AAACCTTGAA CCTCAGTCCC TAGAGCTTGG CTTGATTTGG GCGGCAGTTG GGGTCTTGTA CTTGGCGCTG CGAAGCCTGC GTTTACGCAA GACAGTAGAG TTACAGAATT AA
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Protein sequence | MSQQNPGLKQ SLSLWQVVVM GLAYLTPMAV FDTFGIVSEI TSGHVATSYL LALAGILFTA FSYGHLVRKY PYAGSAYTYA QKTFSPNVGF MVGWSSLLDY MFMPMINMLL AKIYLTAMFP NVEPWIFIFG LVAVMTVLNL RGIDLVANFN GVIVFAQIAI ILVFIGLMAH SLSLGEGEGV IASVRPFYSE EISLAPLFTG ATILCFSFLG FDGLSSLSEE TKDAKRVIPR AIVLTALIGG VIFVSVSYFL QLFFPDISRF QQLDAVLPEI ALYVGGNLFQ SVVLVATTIA VLASGMAAHA GVARILYVMG RDNMLPNKGF GYIHPKWRTP AFNVILVGLL ALSAVSFDLE MALALVNFGA LVAFTFVNLS VIVQFYIKEK RNQSLKDHFQ YFVLPLCGAA TIGVLWLNLE PQSLELGLIW AAVGVLYLAL RSLRLRKTVE LQN
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