Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3382 |
Symbol | |
ID | 4253948 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 4035852 |
End bp | 4036256 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 638120020 |
Product | 4-carboxymuconolactone decarboxylase |
Protein accession | YP_735505 |
Protein GI | 113971712 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | [TIGR02425] 4-carboxymuconolactone decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGATG AACAATACGA GAAGGGGCTG GAAGTACGCC GCGCCGTGAT GGGCGATAGT TTTGTCGATA AGGCCTTGAG CAGTGCCACG GATTTTACGC GTCCATTACA GGAGTTGGTG ACGGCGAACT GCTGGGGCGA GGTTTGGGTG CGTGAGGGGC TTTCTCGGCA AACTCGCAGT CTTGTGACCA TAGCGACGCT TGCCGCGTTA AAGGCATCGA CCGAATTAAA AGGCCATGTG CGCGGCGCGT TGCGTAATGG TTGCACTGTG GAAGAAATCC AAGAAGTGCT TTTACATTCA ACCATGTATT GCGGCATGCC ATCGGGCATT GAGGCTTTTC GGGCGGCAAA AGAAGTGATT GAAGAGTGGC AGGCTGAGCA GGCCAAGGTG TCGGGGCAGC CTTAA
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Protein sequence | MNDEQYEKGL EVRRAVMGDS FVDKALSSAT DFTRPLQELV TANCWGEVWV REGLSRQTRS LVTIATLAAL KASTELKGHV RGALRNGCTV EEIQEVLLHS TMYCGMPSGI EAFRAAKEVI EEWQAEQAKV SGQP
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