Gene Shewmr4_3382 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3382 
Symbol 
ID4253948 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4035852 
End bp4036256 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content54% 
IMG OID638120020 
Product4-carboxymuconolactone decarboxylase 
Protein accessionYP_735505 
Protein GI113971712 
COG category[S] Function unknown 
COG ID[COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit 
TIGRFAM ID[TIGR02425] 4-carboxymuconolactone decarboxylase 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATG AACAATACGA GAAGGGGCTG GAAGTACGCC GCGCCGTGAT GGGCGATAGT 
TTTGTCGATA AGGCCTTGAG CAGTGCCACG GATTTTACGC GTCCATTACA GGAGTTGGTG
ACGGCGAACT GCTGGGGCGA GGTTTGGGTG CGTGAGGGGC TTTCTCGGCA AACTCGCAGT
CTTGTGACCA TAGCGACGCT TGCCGCGTTA AAGGCATCGA CCGAATTAAA AGGCCATGTG
CGCGGCGCGT TGCGTAATGG TTGCACTGTG GAAGAAATCC AAGAAGTGCT TTTACATTCA
ACCATGTATT GCGGCATGCC ATCGGGCATT GAGGCTTTTC GGGCGGCAAA AGAAGTGATT
GAAGAGTGGC AGGCTGAGCA GGCCAAGGTG TCGGGGCAGC CTTAA
 
Protein sequence
MNDEQYEKGL EVRRAVMGDS FVDKALSSAT DFTRPLQELV TANCWGEVWV REGLSRQTRS 
LVTIATLAAL KASTELKGHV RGALRNGCTV EEIQEVLLHS TMYCGMPSGI EAFRAAKEVI
EEWQAEQAKV SGQP