Gene Shewmr4_3374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3374 
Symbol 
ID4253940 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp4022985 
End bp4027901 
Gene Length4917 bp 
Protein Length1638 aa 
Translation table11 
GC content47% 
IMG OID638120012 
Productpeptidase S8/S53 subtilisin kexin sedolisin 
Protein accessionYP_735497 
Protein GI113971704 
COG category 
COG ID 
TIGRFAM ID[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain
[TIGR01451] conserved repeat domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTACAC ACAATAAAGT CGCCGTGATG GTGGCGACCG CTTTATACGT TGGAAGCGGT 
ATTGCTTCAA CAAGCGCACT TAATACGGTC GAACCGTCTT CAGCATGGGG ACCCGCACCT
GCGGATTACG CGCCCAAACC ATTAGCGGAA GACACTTTTA CTTGGGAAAA CCAAGTCAAT
AAAACAATTA AAAAACAACA TGCAGTCTTC AATGCTGAAG CCGATATTCA AGGTGTTCAC
AAGTATATAG TACAACTTAG TGATGCTCCT ATTTCGACCT ATCAGGGTGG TGTCGGTCAG
TTGGCCGCGA CACAAACTAC GGTTGCTAAG GCACGAAATA CCAAAGCACC GCTCAACTTA
AACCAGCCCC AGCTCAAAGC CTATAACAAC TATCTGGCAG AAAAACGTGC TGCTGTTGTC
TCACAAGCGC AAACATTACA GGGACTCGAT TTAAAAGTCG GTCGTGAGTT TTCGGTTGCG
CTTAACGGTT TTGTCACTGA AATGACGCAG GAGCAGGCGG CCAAACTGGC GAAGGTGCCC
GGCGTTAAAC GCATTACCCG TGAAAAAATC TACGAGCTTA AAACCTTTAG CACGCCAGAC
CAAACGGGGG CGACGAGTGT ATGGAGCAAC AGTGCGCTCA ATAGCTCCAA TATGGGTGAA
GGTATGGTTG TCGGTGTTAT CGATACCGGT ATTAATGCCG ACCATCCTTC ATTTGCAGCC
GTAGGTGGCG ATGGTTACAA ACATACCAAC CCGCTCAATG GCAAATACTT AGGTGATTGT
GCGGCTTCAC CTGAGTACTG TAACGATAAG TTGATCGGGA TTTATTCCTA TCCAGAAATT
ACTAAGGCGT ATACCGATCC GGTATTTAGC GAGACCCGTC CCGCAATCGG TTTGGATTAT
AACAGCCATG GTTCTCACGT CGCTGGTACT ATTGCGGGTA ACGTGATCAA AGACTTACCT
CATACCATTA CCGAATACAC TCCAGACGGC AAAGGGATAG AAACGGGGTT AGTGTTACCG
CAAGTGTCAG GTATGGCTCC CCACGCCAAT ATCATCGCCT ATCAAGTCTG CTGGCCAGGT
GGTTCGGGAG ATCCTTATGC AGGTTGTCCA ACGTCGGCCA TCGTGGCGGC AATTGAACAA
TCTGCTATCG ATAATGTTGA CGTTATCAAT GCTTCACTCG GTGGATTAGA AGAAGACCCA
TGGTCAGAGC CAATGGAACA AGCCTTCTTG AATGCGGCGG CATCGGGCGT ATTTGTGGCC
GTGGCTGCGG GTAACTCAGG TCCTGAGTTA ATGACGGCCG ACCATTCATC ACCTTGGGTA
ACCACAGTAG CTGCTCATAC TGCCGATCAA ATTGTGACCT TCAAGGCTAA TGGTGTAGAG
AATCTGTCTG GCGGAGCAAC CACAGCACCG ATGAACATTA TTGGTTCGAC CAAAAACTTT
CAGTCGGTGA CAGGGTTAGT GGTAGATGCC AAAAACTTCA AAAACCCGAA TGAGACTATC
ACTTCAAACA TTAAGAACTG TGATAAGCCT TTCCCTGCTG GCACTTTCGA TCTGGCTGAT
AATCCTGCGA CTACCGATAT CGATGAAAGT CAGCAAGATG TGATAGTGCT TTGTTCTCGT
AGCTCTTTGC CCCTATTGAA CAAGGCGGCC AACGTGCAGG CGGGTGGCGG CGAAGGTATT
GTTATTGCTA GCCTTTCGCC AACTCAAGAT AACAATCTTC CTGGCGTGCC TTATGCTATC
CCTGGGACGT TAGTTAAGTA CAGCGATGGT AATTTGCTGC GTACTTGGTT GGCCTCGGGT
GCGGGTCATA TGGCGACGCT AACGGCGGGC GGTGCTGAAT TGAGTGCTGT TGATAAAGAG
CGGGTGGCGA ACTTCTCTGG CCGTGGCCCT TCTTATTTTG GTATCGATAC CTTGCTTGTC
GACATCGCTG CACCGGGAGT CGATATTTTT GCTCCTGCAT CGGATGACCA ACCATTCACC
AAAAATCCGG TCACTGGACA ATGGGCGACC TTATCCGGCA CTTCAATGGC GAGTCCACAT
GTTGCGGGCG CAGCCACGAT ATTGCGCCAA TCTCATCCTG ACTGGACGCC AATGCAGGTG
CAATCAGCCT TGATGATGAC GGCATCCAAT ACGTTAACGA ATGCGAGTTT TTTGGATAAC
TATTCAGACT ACGGTGATGT ATCTGCTCTA CAGGATGCGG GCGCGGGTCG CATGCATGTA
GAGTTAGCGG ATAAAGTGGG CTTACTCCTC GATGAGTCAA TGGACAACAT GGCTGCAGCC
AACCCCAATT TAGGCGGTCG TCCTAAGAAT CTGAACACTG CGTATATGGT TGACACTAAC
TGTCCTAACG AGTGCTCATT TGTACGTACT TTTACCGCGA CAGAGGATGG CCACTGGACC
GTTGATAGCG AAACTTGGAT GGGGAACTTC GATATTAGCG TTCAGCCAAC AAGTTTTAGC
ATAAAGGCCG GAGAAACCCA GTCTTTAGTT ATTAAAGCTA AGAACAAAAA GAACGTATCA
GGTGCTATCT ATTTGGATTA CACGGGTAGT CAAGGGCAAG TGAGATTGGT CTCTGATAAT
CCAAACTCAC CTGTGTTGGA ACTTCCCGTG TGGACCTATG AAGGTGATTC AGGCTTACCG
AATTACGTAA AAATTAATGC TCACCGTAAG TCGGCAACCT TGAATGTTGG TCCCTTTAAT
ACCGCAGAAA TTACTGATTT TACTGCGCGT AGTTATGGTT TAGCGAAGGG AGACGATAAG
ACCATTCACA CCTATATAGA TACAACCGGT GGCGATCCCT TCGACACTGT TGAAGTCGAT
GGTGTGCAAG TGAACCCCAA CCATATCGAG TGGACCGAGG TGCCAGAAGG CACTAAGTTG
CTTGCGGGTA GTGTTGTTGG TAATGATTAT GGCCGAGTAT TGGTCTTTAT GGGGCAAGAC
TCAGACGGCG ATGGTGTTCC ATCAATGGAT GAAACCTTAT GTATGTCAAC CAACTACAGC
ATTGCTAACT TCTGTACTAT CAGTAACCCT CAGGCTGGAC GTTATTTTAC TGTCTATATG
AACTTGGCGA GCCTCTCGTA CGGGCAAGTG GACCAAGGTC GCGATATCAG TATCTCGACC
GCTCTGGTAA CTGGGGATGA GGGTAACTTA ACGGTAAAAG CGCCTGCGCA GATCCCTGGT
TACTCTGAGT ATAAGCTCGA GTTAGCTTAT CAACTGCCAG AAATGGAAGT TGGCAATACC
TACTTCGGTG GTTTTGACAT AGGTTCTAAT GCCAATGATG CGGGTAACTT AGGTTTTGTG
CCTGTGATTG TTAACCAAAT CGATAAGGAT GTGACCTTTA CTGCGAGCCG TGAAACGGCA
ATTCCTGGTG AAGTGATTGA GTTCCAAGTC AATGTGATTG CCAACAATGA AGAGCAGGCC
CGAGATTTTG CTTTGAACGC ATCATTCCCT GATGCCATTC AAATTATCCC TGACAGCGTA
GTCGCCTCAC ATGCAACGCC TGGTACGCCT GTATTAGAAA ATAATGCCCT CAGCCTCACT
GGCGTGCAGG AAACGACAAA AGACGTTGTG CGTAACTATA AGATCACTAA CAACCAAAAC
GATCCTATGT GCTCATTGAC GGCGGCTAAA TCACCTTATC CTGGTTACCT TGAATTGAAG
GAAAACCTTG GTTGGAAAAC GCTAGAAGGT GTTGAAGGGG CTTACTATAA CGAGTTCCAG
TATAAGCTAA AGGACTTGAT GAATAGTGAA GCGGATATTA GTTTCCCATT CTTTAACAAG
TACTTTGTGG ATACGATTAA ACTCAACCCT GCAGGTTTAG TGACATTCAA CACCGCACGT
CGTACACCCG TGTCGCACGT TGAATTTCCA TCCGGCACGC TTGGATTGTT ACCTATGCCA
GAATTTATTG TTGCACCATT CTGGACTGGG GATAACCGCA TTCCAAAACG TTTCGACGCT
GGTTATGGTC AATATCACCT TAACGCGGGT ATCACCCCTA CCTATACCAT TGCTCGTGAT
TGGTTAGTGT TGGAGTGGGA TAACGTTGAA CGTGCGAATA CTCCTGGCCA ATTGGTTGAT
TTTGAAATGT TCTTACGTAT GAACATCAAC TATGAACCAG GTAACTATGA GATGTTGTTT
GCCTATGACA ATCTTCAAAT GGTGGATGAT AAGGGGTCTA TCGGCTTCAA AGCGGCCGAT
GGTCGGATCA TTGTCGATGG CGATACTCCG ATGGATCTCA ACCTAGGTGA TTCGGTGGCA
TACAATAATT TAGGGTCAGT ACTGAGCAAT AAGTTTGTGG TTTGTATGGA CTATACCGGT
CCAGAAGAAT CACAGTTTAA CCTGCAGTTT AAGGCCTATG TATCTGAAAA AGCAGCGGGA
ACGACTCAAA CTCTCAAAGT TGAAAACCAC TTAGTGGGTG CCGACAGTGA AGTGCTTGAG
TTGCAACTCG CCGTGGCTGG CAATATTCAG CTCGCAGCCA TTGCCGATAA GATGGTTAAG
GAAAATGAAT CTATTAGCTT CGATGTGCTC TATTCGGATG AAAACCAAGT GAGCAATATG
ATTGAGGTGA TGGGTGATAA CTTTACAACA ACCGTGAATG GTAACACTGT GACGTTAACG
CCGACGGCTA ACTTCCATGG CGAAACCCGA GTCACTGTTA TGGTAAAAGA TAGCGTGAAC
CCAGAAGATG CGGCATCGAC CAGTTTCAAC CTTGTTGTTG AGTCCGACGG TATTGAGTAT
GGCTGTACTA ACAGCAGTGC GACTAACTAT GATGCCTCAG CCAATACCGA TGATGGCAGC
TGTAAGTTGC CTGCGGTCAT CGTTGAGCCT GAAGAGAAAA GTTCGGGCGG TGCTTTAGGC
TGGTTAGCCT TAGGTTTACT CCCGTTAGCC TACAGAAGAA ACCGTAAAAC ACATTAA
 
Protein sequence
MLTHNKVAVM VATALYVGSG IASTSALNTV EPSSAWGPAP ADYAPKPLAE DTFTWENQVN 
KTIKKQHAVF NAEADIQGVH KYIVQLSDAP ISTYQGGVGQ LAATQTTVAK ARNTKAPLNL
NQPQLKAYNN YLAEKRAAVV SQAQTLQGLD LKVGREFSVA LNGFVTEMTQ EQAAKLAKVP
GVKRITREKI YELKTFSTPD QTGATSVWSN SALNSSNMGE GMVVGVIDTG INADHPSFAA
VGGDGYKHTN PLNGKYLGDC AASPEYCNDK LIGIYSYPEI TKAYTDPVFS ETRPAIGLDY
NSHGSHVAGT IAGNVIKDLP HTITEYTPDG KGIETGLVLP QVSGMAPHAN IIAYQVCWPG
GSGDPYAGCP TSAIVAAIEQ SAIDNVDVIN ASLGGLEEDP WSEPMEQAFL NAAASGVFVA
VAAGNSGPEL MTADHSSPWV TTVAAHTADQ IVTFKANGVE NLSGGATTAP MNIIGSTKNF
QSVTGLVVDA KNFKNPNETI TSNIKNCDKP FPAGTFDLAD NPATTDIDES QQDVIVLCSR
SSLPLLNKAA NVQAGGGEGI VIASLSPTQD NNLPGVPYAI PGTLVKYSDG NLLRTWLASG
AGHMATLTAG GAELSAVDKE RVANFSGRGP SYFGIDTLLV DIAAPGVDIF APASDDQPFT
KNPVTGQWAT LSGTSMASPH VAGAATILRQ SHPDWTPMQV QSALMMTASN TLTNASFLDN
YSDYGDVSAL QDAGAGRMHV ELADKVGLLL DESMDNMAAA NPNLGGRPKN LNTAYMVDTN
CPNECSFVRT FTATEDGHWT VDSETWMGNF DISVQPTSFS IKAGETQSLV IKAKNKKNVS
GAIYLDYTGS QGQVRLVSDN PNSPVLELPV WTYEGDSGLP NYVKINAHRK SATLNVGPFN
TAEITDFTAR SYGLAKGDDK TIHTYIDTTG GDPFDTVEVD GVQVNPNHIE WTEVPEGTKL
LAGSVVGNDY GRVLVFMGQD SDGDGVPSMD ETLCMSTNYS IANFCTISNP QAGRYFTVYM
NLASLSYGQV DQGRDISIST ALVTGDEGNL TVKAPAQIPG YSEYKLELAY QLPEMEVGNT
YFGGFDIGSN ANDAGNLGFV PVIVNQIDKD VTFTASRETA IPGEVIEFQV NVIANNEEQA
RDFALNASFP DAIQIIPDSV VASHATPGTP VLENNALSLT GVQETTKDVV RNYKITNNQN
DPMCSLTAAK SPYPGYLELK ENLGWKTLEG VEGAYYNEFQ YKLKDLMNSE ADISFPFFNK
YFVDTIKLNP AGLVTFNTAR RTPVSHVEFP SGTLGLLPMP EFIVAPFWTG DNRIPKRFDA
GYGQYHLNAG ITPTYTIARD WLVLEWDNVE RANTPGQLVD FEMFLRMNIN YEPGNYEMLF
AYDNLQMVDD KGSIGFKAAD GRIIVDGDTP MDLNLGDSVA YNNLGSVLSN KFVVCMDYTG
PEESQFNLQF KAYVSEKAAG TTQTLKVENH LVGADSEVLE LQLAVAGNIQ LAAIADKMVK
ENESISFDVL YSDENQVSNM IEVMGDNFTT TVNGNTVTLT PTANFHGETR VTVMVKDSVN
PEDAASTSFN LVVESDGIEY GCTNSSATNY DASANTDDGS CKLPAVIVEP EEKSSGGALG
WLALGLLPLA YRRNRKTH