| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3356 |
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| Symbol | |
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| ID | 4253922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 4003137 |
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| End bp | 4004921 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119994 |
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| Product | ABC transporter related |
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| Protein accession | YP_735479 |
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| Protein GI | 113971686 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG5265] ABC-type transport system involved in Fe-S cluster assembly, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0405132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCCAA CACTGTATTT TGAAGGTCCC ATCGATAAGC TCAATTGGCA CGTAGTTAAG
TTGCTCTGGC CTTATTTGCT CGAGTACAAG GGCCGAGTGG CATTGGCCAT GTCTTGCCTT
ATCGTCGCTA AGCTTGCCAG CGTGGGCTTG CCCTTTATTC TTAAAGATTT AGTCGATACT
TTGGATGCCA ATAAGACCGC GCAGGCCTTG AGTGTGCCCA TCGGGTTGGT ATTAGCCTAT
GGCGCGGTAC GACTGTTAAC TGTGATCACG GGTGAAATCC GCGACACACT CTTTGGCCGT
GTCACTGAGC GAGCCATTCG CCGTTTGGGC TTAGCGGTGT TCGACCACTT ACATCGACTC
GATTTGGATT TTCACTTAGA GCGGCGCACG GGCGGCTTGT CGAGGGATAT TGAGCGCGGC
ACCAGTGGCG TGAGCTTCTT GATGCGCTTT ATGGTGTTTA ACATAGTGCC GACCCTGCTA
GAAATCGCCA TGGTTATTGG TATTTTCTTT TTTAATTATG GCATTGCCTT CGCCGCGATC
ACTTTTACCT CTGTGATGGC CTACATCTGG TTTTCGGTGG TGGCGACTGA GTGGCGCACC
GAATACGTCC GCGATGCAGC CAAAGCCGAC TCCCTCTCCA ATACCCGCGC CATCGACAGC
CTGCTCAACT ATGAAACCGT GAAGTATTTT AATAATGAAA AGTATGAATC GGACCGTTAT
GACCAAGCCC TAGACCAATG GGAAGTGGCT AAACGTAAGA ATCGTCTATC GCTATTTGCC
CTCAACGGTG GGCAGGCGCT GATTATCGCA TTGGCGATGA CGGCGATGAT GGCGTTGGCC
GCCTATAAAG TGACCAATAA TGAGATGACC TTAGGTGACT TTGTATTGAT TAATGCCTTT
ATGATGCAGC TCTTTATGCC GCTCAACTTT TTGGGATTTG TCTACCGTGA AATCCGTGGC
GCCTTAGCCA ATATCGAGCG GATGTTCAGT CTGCTCGATA AGCACCCTCG TATAGTGGAT
AAACCCGATG CCTTAGACTT TGAGCCTAAG CGCGGTGAGC TTAGTTTTGA ACATGTAAGT
TTTAGCTACG ATGACAGGCC CATATTGCGC AACGTCAGTT TTAAGGTGGC AGCGGGGAAA
AAAGTCGCCG TCGTTGGAGA TAGTGGCGCC GGAAAATCAA CACTCATCAA GTTACTGTTC
CGTTTTTACG ATGTGGAGCA AGGGCGCATT TTGATTGACG GGCAAGATAT TCGTCACTTA
ACCCAGGATG CACTGCGCCG AGCTATTGCC ATAGTGCCGC AGGATACTGT GTTATTTAAT
GATTCCTTAG TGGAGAACAT TCGTTATGGC CGCCCCGATG CGACGGATGA AGAAGTGCGC
CATGCCATCA AACTTGCACA TTTAGAACAT TTTATCGCGT CGCTCTCCCA AGGTTGGGAT
ACCAAAGTGG GTGAGCGGGG CTTAAAGCTT TCGGGCGGGG AGAAACAGCG TGTGGCCATT
GCGCGGGCGA TTTTAAAAGG ATCCCCAGTG TTAGTCTTTG ATGAGGCTAC ATCCTCCCTC
GACAGCCGCT CCGAACAGGC GATTCTGTCG GCACTGCGTG AGGTCGCGAA AGGGCATACC
AGCTTAGTCG TGGCGCATAG GTTATCGACT ATAGTCGACG CCGATCAGAT CGTGGTCTTA
AGCCAAGGGG AAATTGTCGA GCAGGGGAAT CATCAGTCTT TACTGACTCA GGATGGTTTA
TACGCTAAGT TGTGGCGCAT ACAAAATGAG CAACAACAGC TTTAG
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| Protein sequence | MRPTLYFEGP IDKLNWHVVK LLWPYLLEYK GRVALAMSCL IVAKLASVGL PFILKDLVDT
LDANKTAQAL SVPIGLVLAY GAVRLLTVIT GEIRDTLFGR VTERAIRRLG LAVFDHLHRL
DLDFHLERRT GGLSRDIERG TSGVSFLMRF MVFNIVPTLL EIAMVIGIFF FNYGIAFAAI
TFTSVMAYIW FSVVATEWRT EYVRDAAKAD SLSNTRAIDS LLNYETVKYF NNEKYESDRY
DQALDQWEVA KRKNRLSLFA LNGGQALIIA LAMTAMMALA AYKVTNNEMT LGDFVLINAF
MMQLFMPLNF LGFVYREIRG ALANIERMFS LLDKHPRIVD KPDALDFEPK RGELSFEHVS
FSYDDRPILR NVSFKVAAGK KVAVVGDSGA GKSTLIKLLF RFYDVEQGRI LIDGQDIRHL
TQDALRRAIA IVPQDTVLFN DSLVENIRYG RPDATDEEVR HAIKLAHLEH FIASLSQGWD
TKVGERGLKL SGGEKQRVAI ARAILKGSPV LVFDEATSSL DSRSEQAILS ALREVAKGHT
SLVVAHRLST IVDADQIVVL SQGEIVEQGN HQSLLTQDGL YAKLWRIQNE QQQL
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