Gene Shewmr4_3323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3323 
Symbol 
ID4253889 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3967324 
End bp3968988 
Gene Length1665 bp 
Protein Length554 aa 
Translation table11 
GC content51% 
IMG OID638119961 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_735446 
Protein GI113971653 
COG category[T] Signal transduction mechanisms
[N] Cell motility 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTAATT TCAGTTTACG TAACAAATTG CTCCTACTCG CACTGTTCCC GTTGATTCTG 
ACCCTCATAG TGCTGATGAC AGTTTCCTAC CATGTCGAGC AATCGGCGCT TGCCGATGAA
GTCACCACAT TTAGAGAAAA GTTAATCGGT GAGCGTAAAA CCCAAATCAA AGAAGCCACC
CAAATCGCCG CAGGCATAGT GCAATACCAG CTATCGTTAA AAGAACAGGG CAATGTTAAC
CAAGCCCTAC GTGATATTCG CTTTGGCAGT TCGGGCTACT TCTTTATTTA CGATTCCCAA
GGTAAAAACC TATTCCATGC GGTCATGCCC AACCTCGAGG GGCAGAATAA AATCGATATG
ACCGACCCCC GTGGCACCAA GATCATTGTC GGCCTACTCA ATGCCGCCAA AAACGGTGAC
GGTAATTTCT CGTTCTATTT CCAAAAACCC AATACCAACG AGCAAATCGA AAAAATCGGC
TACTCCATGA TGATCCCAGG CACAGATTGG ATGCTCGGCA CTGGCGCCTA TATCGACGAT
ATCGATGCCG TGGTTGAGGA TTACCGCACC ACAGTCACCG AGCAGATGAT CGATAAGTCC
TACGCGATTT TATTGATTGC ACTGTTATTA GCAGCCATTA CCGCCGCCGT GATCTTAGTG
ACCGCCCAGC GCATGGTCAC ACCAATTAAA AACATGGCCG ATAACTTAAA CGATATCGCC
AAAGGCGAAG GCGATTTAAC CAAGCGCCTC GCGGTGAAGG GCGACGATGA AATCGCTCAA
CTCGGCCGCT CCTTCAACCT GTTTGTCGAT AAACTGCAAA CCATTATCGG CGATGTGGCC
CATGCCACCG CTAAGGTCAA AACCGCAGCC AATGCGATTC ATGACCAAAC TAAGGTGATG
TCGCGCCAGC TTATCAGCCA TAACAATGAA ACAGATCAAG TGGTTACCGC CATTACTGAG
ATGTCTGCCA CCGCGAGTGA AGTAGCGCAA AACACCACCC AAGTGGCCGA AGCGACCCAC
GCCGCCACGG GCGATGTGGC CAATGCCCAG CGTTGTGTCG ATGCCTCGTT AGAGGAGATT
TCGGCGCTGA TGGCGCAAAT CAATAATGCC GCCAGTAACA TTCAATCCTT GAGTGAACAG
TCGCAAAAAA TTAATAGCGT GCTCTCGGTG ATCGGCGGCA TTGCCGAGCA AACCAACCTG
TTGGCATTAA ATGCCGCGAT TGAAGCCGCC CGCGCTGGCG AGCAGGGTCG TGGCTTTGCC
GTGGTGGCCG ATGAGGTACG TAACTTAGCC AGCCGTACTC AATCAAGCAC ATTAGAAATC
AACGAGATGC TATCTGAACT GCACAAGCTG GTGAGCTTAG CGGTTAAAAC CATGGAAGAG
AGTCAGCAGA GTTGTATACG CTCGGTGGAT TCGTCCCGCG CCATCTCCGA AAGCTTAGGC
TCAGTGACCT CGGCGGTGAC CGCCATCAAC GATATGAGTA CCCAAATTGC CACGGCGGCG
ACCGAGCAAA GCTCAGTGAC CGAAGAAATC AACCGCAATG TGTTTGCTAT TCAAGAGATT
GTGAATGAGC TGCTGCACTC TAGCGAAGAG GCGGCGAGCG TGAGCCAAAC CGTGTCGCAG
GAAGGACTTA ACCTCGGCAA ACTCGTCGGC CAATTTAAGA TTTAA
 
Protein sequence
MSNFSLRNKL LLLALFPLIL TLIVLMTVSY HVEQSALADE VTTFREKLIG ERKTQIKEAT 
QIAAGIVQYQ LSLKEQGNVN QALRDIRFGS SGYFFIYDSQ GKNLFHAVMP NLEGQNKIDM
TDPRGTKIIV GLLNAAKNGD GNFSFYFQKP NTNEQIEKIG YSMMIPGTDW MLGTGAYIDD
IDAVVEDYRT TVTEQMIDKS YAILLIALLL AAITAAVILV TAQRMVTPIK NMADNLNDIA
KGEGDLTKRL AVKGDDEIAQ LGRSFNLFVD KLQTIIGDVA HATAKVKTAA NAIHDQTKVM
SRQLISHNNE TDQVVTAITE MSATASEVAQ NTTQVAEATH AATGDVANAQ RCVDASLEEI
SALMAQINNA ASNIQSLSEQ SQKINSVLSV IGGIAEQTNL LALNAAIEAA RAGEQGRGFA
VVADEVRNLA SRTQSSTLEI NEMLSELHKL VSLAVKTMEE SQQSCIRSVD SSRAISESLG
SVTSAVTAIN DMSTQIATAA TEQSSVTEEI NRNVFAIQEI VNELLHSSEE AASVSQTVSQ
EGLNLGKLVG QFKI