Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3321 |
Symbol | |
ID | 4253887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3964414 |
End bp | 3966642 |
Gene Length | 2229 bp |
Protein Length | 742 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119959 |
Product | hypothetical protein |
Protein accession | YP_735444 |
Protein GI | 113971651 |
COG category | [S] Function unknown |
COG ID | [COG1944] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00702] uncharacterized domain [TIGR03549] conserved hypothetical protein TIGR03549 |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGATTAC CGCGTTTGAG CATATTGAGT GGAAAAATTC TAATGGAAAT CAAAGTTAAT TTTCTCGACA ACCTGAGACT CGAAGCCAAG TTCGACGATT TTACGGTAAC GGCCGATCAG CCCATCCGTT ATAAGGGCGA CGGCTCGGCG CCGAGTCCCT TCGATTACTT TTTAGCTTCT TCGGCATTGT GCGCCGCCTA CTTTGTGAAG GTATATTGTA AATCCCGCGA TATTCCGACG GACAATATCC GTCTGTCGCA AAACAATATT GTCGACCCAG AAGATCGCTA CAACCAGATT TTCCAGATCA ATGTCGAATT ACCCGACGAT ATTTCGGATA AAGATCGCGA AGGTATTTTG CGCTCCATCG ACCGCTGCAC AGTAAAGAAA GTCGTGCAGA CTGGCCCAGA ATTTAGAATC GAAACCGTTG AAAACCTCGA TGCCGATGCC AATGCCATGT TGATGGGTCA CCCAGGCGAC GACAGTAGCA CCTATATCTT GGGTAAAGAC TTACCGCTGG AGCAGACCAT TGCCAATATG ACCGGCATTT TGGCTGAGCT TGGGATGAAG ATTGAGATCT CCTCATGGCG TAACATTGTG CCCAATGTGT GGTCACTGCA TATCCGTGAC GCCGCATCAC CCATGTGTTT TACCAATGGT AAAGGCGCAA CCAAAGAGAG CGCGTTGTGC TCGGCCCTCG GTGAATTTAT TGAGCGTTTA AACAATAACT TTTTCTATAA CGATCAATTC TTTGGCGTTG AAATCGCCAA TAGCGAGTTT GTGCATTATC CCAACGAAAA GTGGTTTGCC CTAGAGGAAG ACGACGCCCT GCCAGCGGGT CTGTTAGACG ACTACTGCCT AGAGATTTAT AACCCCGATG AGGAGCTGTG TGGCTCACAT CTTATCGACA CTAACTCGGG CAATCGTGAC CGAGGCATTT GTGCGATTCC GTACAAGCGT AAATCCGATG GCGAGACTGT GTACTTCCCA TCGAACCTGA TTGAAAACCT GTTCTTAAGC AATGGCATGA GCGCGGGTAA CAACATCAAA GAAGCCGAAG TACAGTGTCT CTCTGAAATC TTCGAGCGCG CGGTGAAACG CCAAATTATC GAGCAAGAAA TCGTCCTGCC AGACGTGCCT ATGTCGGTGT TAGAAAAATA CCCAAGCATT CTTGCGGGCA TTAAGGGCTT AGAAGAACAA GGCTTCCCAG TGGTGGTGAA AGATGCCTCC TTAGGCGGTC AGTTCCCTGT GATGTGCGTG ACGCTGATGA ATCCGAAAAC CGGCGGGGTA TTCGCCTCCT TCGGTGCCCA CCCAAGCTTT GAAGTGGCAT TGGAGCGCAG TCTGACCGAA TTGCTCCAAG GTCGCAGCTT CGAAGGCTTA AACGATGTGC CAAAACCGAC CTTTAACAGC ATGGCGGTGA GCGAGCCTGA AAACTTTGTT GAGCACTTTA TCGACTCAAC TGGGGTGATC TCATGGCGCT TCTTTAGCAG CAAGCATGAC TATGAGTTCT GCGAATGGGA TTTCTCTGGC ACTAACCAAG AGGAAGCGGA CCGTTTATTC GGCATTTTAG AAGAGCTAGG TAAAGAGGTG TATGTCGCCG AATTTACCGA ATTAGGCGCA TCGGCTTGCC GTATTTTAGT GCCTGATTAC TCAGAAGTTT ATCCAGTAGA AGACCTGATT TGGGACAACA CCAACAAGGC GCTGGATTAC CGTGAAGATA TTCTGAATCT GCATTCTTTA AGCACTAAGC AATTGGTTAA CCTAGTCAAT CGTTTAGAAG AAAGTCAGCT CGATAACTAC ACCGATATTC GTACCCTGAT TGGTATCGTC TTCGATGAAA ATACCGTTTG GGGTAAGTTG ACGATTATCG AACTTAAGAT CTTGATTTAT CTGGCACTCG GCGCGCATGA AGAGGCGTTG GAATTAGTCG GTGAGTTCCT GCAATTTAAC GATAATACCG TGAAGCGCAA TCTGTTCTTC CAAGCAATGA GCGCGGTACT GGAAGTGACG CTGGATGAAG ACCTTGAGCT CGAAGACTTT AGCCATAACT TTACCCGCAT GTTTGGCGCG GAAGTGATGG AACAAGTGGT CGGTAGTGTT ACTGGTAAAG TTCGTTTCAG CGGTTTAACT AAGACCAGCA TGCAGCTCGA AGGGATTGAG CCACATTTAC GCTTAATCGA GAGCTATAAG AAACTGCACG CCGCCCGCAA GGCCAAAGCG GCGAACTAA
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Protein sequence | MRLPRLSILS GKILMEIKVN FLDNLRLEAK FDDFTVTADQ PIRYKGDGSA PSPFDYFLAS SALCAAYFVK VYCKSRDIPT DNIRLSQNNI VDPEDRYNQI FQINVELPDD ISDKDREGIL RSIDRCTVKK VVQTGPEFRI ETVENLDADA NAMLMGHPGD DSSTYILGKD LPLEQTIANM TGILAELGMK IEISSWRNIV PNVWSLHIRD AASPMCFTNG KGATKESALC SALGEFIERL NNNFFYNDQF FGVEIANSEF VHYPNEKWFA LEEDDALPAG LLDDYCLEIY NPDEELCGSH LIDTNSGNRD RGICAIPYKR KSDGETVYFP SNLIENLFLS NGMSAGNNIK EAEVQCLSEI FERAVKRQII EQEIVLPDVP MSVLEKYPSI LAGIKGLEEQ GFPVVVKDAS LGGQFPVMCV TLMNPKTGGV FASFGAHPSF EVALERSLTE LLQGRSFEGL NDVPKPTFNS MAVSEPENFV EHFIDSTGVI SWRFFSSKHD YEFCEWDFSG TNQEEADRLF GILEELGKEV YVAEFTELGA SACRILVPDY SEVYPVEDLI WDNTNKALDY REDILNLHSL STKQLVNLVN RLEESQLDNY TDIRTLIGIV FDENTVWGKL TIIELKILIY LALGAHEEAL ELVGEFLQFN DNTVKRNLFF QAMSAVLEVT LDEDLELEDF SHNFTRMFGA EVMEQVVGSV TGKVRFSGLT KTSMQLEGIE PHLRLIESYK KLHAARKAKA AN
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