Gene Shewmr4_3321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3321 
Symbol 
ID4253887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3964414 
End bp3966642 
Gene Length2229 bp 
Protein Length742 aa 
Translation table11 
GC content48% 
IMG OID638119959 
Producthypothetical protein 
Protein accessionYP_735444 
Protein GI113971651 
COG category[S] Function unknown 
COG ID[COG1944] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00702] uncharacterized domain
[TIGR03549] conserved hypothetical protein TIGR03549 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGATTAC CGCGTTTGAG CATATTGAGT GGAAAAATTC TAATGGAAAT CAAAGTTAAT 
TTTCTCGACA ACCTGAGACT CGAAGCCAAG TTCGACGATT TTACGGTAAC GGCCGATCAG
CCCATCCGTT ATAAGGGCGA CGGCTCGGCG CCGAGTCCCT TCGATTACTT TTTAGCTTCT
TCGGCATTGT GCGCCGCCTA CTTTGTGAAG GTATATTGTA AATCCCGCGA TATTCCGACG
GACAATATCC GTCTGTCGCA AAACAATATT GTCGACCCAG AAGATCGCTA CAACCAGATT
TTCCAGATCA ATGTCGAATT ACCCGACGAT ATTTCGGATA AAGATCGCGA AGGTATTTTG
CGCTCCATCG ACCGCTGCAC AGTAAAGAAA GTCGTGCAGA CTGGCCCAGA ATTTAGAATC
GAAACCGTTG AAAACCTCGA TGCCGATGCC AATGCCATGT TGATGGGTCA CCCAGGCGAC
GACAGTAGCA CCTATATCTT GGGTAAAGAC TTACCGCTGG AGCAGACCAT TGCCAATATG
ACCGGCATTT TGGCTGAGCT TGGGATGAAG ATTGAGATCT CCTCATGGCG TAACATTGTG
CCCAATGTGT GGTCACTGCA TATCCGTGAC GCCGCATCAC CCATGTGTTT TACCAATGGT
AAAGGCGCAA CCAAAGAGAG CGCGTTGTGC TCGGCCCTCG GTGAATTTAT TGAGCGTTTA
AACAATAACT TTTTCTATAA CGATCAATTC TTTGGCGTTG AAATCGCCAA TAGCGAGTTT
GTGCATTATC CCAACGAAAA GTGGTTTGCC CTAGAGGAAG ACGACGCCCT GCCAGCGGGT
CTGTTAGACG ACTACTGCCT AGAGATTTAT AACCCCGATG AGGAGCTGTG TGGCTCACAT
CTTATCGACA CTAACTCGGG CAATCGTGAC CGAGGCATTT GTGCGATTCC GTACAAGCGT
AAATCCGATG GCGAGACTGT GTACTTCCCA TCGAACCTGA TTGAAAACCT GTTCTTAAGC
AATGGCATGA GCGCGGGTAA CAACATCAAA GAAGCCGAAG TACAGTGTCT CTCTGAAATC
TTCGAGCGCG CGGTGAAACG CCAAATTATC GAGCAAGAAA TCGTCCTGCC AGACGTGCCT
ATGTCGGTGT TAGAAAAATA CCCAAGCATT CTTGCGGGCA TTAAGGGCTT AGAAGAACAA
GGCTTCCCAG TGGTGGTGAA AGATGCCTCC TTAGGCGGTC AGTTCCCTGT GATGTGCGTG
ACGCTGATGA ATCCGAAAAC CGGCGGGGTA TTCGCCTCCT TCGGTGCCCA CCCAAGCTTT
GAAGTGGCAT TGGAGCGCAG TCTGACCGAA TTGCTCCAAG GTCGCAGCTT CGAAGGCTTA
AACGATGTGC CAAAACCGAC CTTTAACAGC ATGGCGGTGA GCGAGCCTGA AAACTTTGTT
GAGCACTTTA TCGACTCAAC TGGGGTGATC TCATGGCGCT TCTTTAGCAG CAAGCATGAC
TATGAGTTCT GCGAATGGGA TTTCTCTGGC ACTAACCAAG AGGAAGCGGA CCGTTTATTC
GGCATTTTAG AAGAGCTAGG TAAAGAGGTG TATGTCGCCG AATTTACCGA ATTAGGCGCA
TCGGCTTGCC GTATTTTAGT GCCTGATTAC TCAGAAGTTT ATCCAGTAGA AGACCTGATT
TGGGACAACA CCAACAAGGC GCTGGATTAC CGTGAAGATA TTCTGAATCT GCATTCTTTA
AGCACTAAGC AATTGGTTAA CCTAGTCAAT CGTTTAGAAG AAAGTCAGCT CGATAACTAC
ACCGATATTC GTACCCTGAT TGGTATCGTC TTCGATGAAA ATACCGTTTG GGGTAAGTTG
ACGATTATCG AACTTAAGAT CTTGATTTAT CTGGCACTCG GCGCGCATGA AGAGGCGTTG
GAATTAGTCG GTGAGTTCCT GCAATTTAAC GATAATACCG TGAAGCGCAA TCTGTTCTTC
CAAGCAATGA GCGCGGTACT GGAAGTGACG CTGGATGAAG ACCTTGAGCT CGAAGACTTT
AGCCATAACT TTACCCGCAT GTTTGGCGCG GAAGTGATGG AACAAGTGGT CGGTAGTGTT
ACTGGTAAAG TTCGTTTCAG CGGTTTAACT AAGACCAGCA TGCAGCTCGA AGGGATTGAG
CCACATTTAC GCTTAATCGA GAGCTATAAG AAACTGCACG CCGCCCGCAA GGCCAAAGCG
GCGAACTAA
 
Protein sequence
MRLPRLSILS GKILMEIKVN FLDNLRLEAK FDDFTVTADQ PIRYKGDGSA PSPFDYFLAS 
SALCAAYFVK VYCKSRDIPT DNIRLSQNNI VDPEDRYNQI FQINVELPDD ISDKDREGIL
RSIDRCTVKK VVQTGPEFRI ETVENLDADA NAMLMGHPGD DSSTYILGKD LPLEQTIANM
TGILAELGMK IEISSWRNIV PNVWSLHIRD AASPMCFTNG KGATKESALC SALGEFIERL
NNNFFYNDQF FGVEIANSEF VHYPNEKWFA LEEDDALPAG LLDDYCLEIY NPDEELCGSH
LIDTNSGNRD RGICAIPYKR KSDGETVYFP SNLIENLFLS NGMSAGNNIK EAEVQCLSEI
FERAVKRQII EQEIVLPDVP MSVLEKYPSI LAGIKGLEEQ GFPVVVKDAS LGGQFPVMCV
TLMNPKTGGV FASFGAHPSF EVALERSLTE LLQGRSFEGL NDVPKPTFNS MAVSEPENFV
EHFIDSTGVI SWRFFSSKHD YEFCEWDFSG TNQEEADRLF GILEELGKEV YVAEFTELGA
SACRILVPDY SEVYPVEDLI WDNTNKALDY REDILNLHSL STKQLVNLVN RLEESQLDNY
TDIRTLIGIV FDENTVWGKL TIIELKILIY LALGAHEEAL ELVGEFLQFN DNTVKRNLFF
QAMSAVLEVT LDEDLELEDF SHNFTRMFGA EVMEQVVGSV TGKVRFSGLT KTSMQLEGIE
PHLRLIESYK KLHAARKAKA AN