Gene Shewmr4_3317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3317 
Symbol 
ID4253883 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3959876 
End bp3960358 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content50% 
IMG OID638119955 
Producthypothetical protein 
Protein accessionYP_735440 
Protein GI113971647 
COG category[S] Function unknown 
COG ID[COG3542] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.676739 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATG CAGATGATTT TATTCAGTAT TTAGAACTTG AGCAGCATGT AGAAGGCGGA 
TATTACCGTT CTTCCTATCG CTCAGAATCG GCTTTTGATC CGAGTCGTCA GCTGTGGAGC
AGCATTTATT TCTTACTGCG AACCGGCGAA GTGTCGCATT TTCATCGACT CACGGCCGAT
GAGATGTGGT ATTTCCATGC GGGTCAATCC CTGACGATTT ATATGATTTC CCCCGAGGGC
GAGCTGACCA CGGCGCAGTT GGGGCTGGAT TTAGCCGCGG GCGAAAGGCC ACAGTTTTTA
GTGCCTAAGG GCTGTATTTT TGGCTCGGCC ATGAATCAAC CAGGGTTTTC GCTGGTGGGC
TGTATGGTGT CACCCGGTTT TACCTTCGAT GACTTTGAAT TGTTTAGCCA AGAAGCTTTG
CGGGCCATGT ATCCGCAGCA TCAAGACGTG ATCCACAAAC TGAGTCGGCC AGAGACGAAA
TAG
 
Protein sequence
MQNADDFIQY LELEQHVEGG YYRSSYRSES AFDPSRQLWS SIYFLLRTGE VSHFHRLTAD 
EMWYFHAGQS LTIYMISPEG ELTTAQLGLD LAAGERPQFL VPKGCIFGSA MNQPGFSLVG
CMVSPGFTFD DFELFSQEAL RAMYPQHQDV IHKLSRPETK