| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3312 |
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| Symbol | |
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| ID | 4253879 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3954000 |
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| End bp | 3955766 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 638119951 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_735436 |
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| Protein GI | 113971643 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3540] Phosphodiesterase/alkaline phosphatase D |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGAA CCGTGACTCG TCGTGATTTT TTAGCCATGT CGGCCAAAGG CATTGGTGCA
GCAGTGATCT CCTACGGCCT AATGGGGTGT AGTGACAGTG ATGATGATAA ATCTGTTCCT
GCGCAGTTTT TACATGGGGT AGCCAGTGGT GACCCTGCGC AAGACGCGGT GATCCTCTGG
ACCCGCGTGA CGCCTGATTC TGCTGGGGAT GTTAAAGTCA GCTGGCAAGT GGCCAGTGAT
GCGGCATTCT CACAATTAGT GACCACAGGG GAGATGGTCA CCAACGCTAA CCGTGATTAC
ACGGTCAAAA TCGATGCCCG TGGTTTACGT GCGGGACAAA CCTACTTCTA CCGCTTTATG
ACGGGCGGAA AAACCTCTGA GGTGGGCAAG ACCCGCACTC TGCCCGAGGG TGATGTGAGT
TCGGTAAAAC TTGCCGTCAT GTCCTGCGCT AATTTTCCAG CCGGCTATTT TAACGTGTAT
GAATTGGCTG CGGCGCAGGA TGACCTCGAT GCCGTGGTGC ATTTGGGTGA CTATATCTAC
GAATATGCTC GCGGCGGCTA TGCCAGCGAA CATGCGGCAG AGCTTGGCCG TGAAGTGTTA
CCCGCCAACG AACTGCTGAC CCTCAGCGAT TACCGTACCC GTTACGGCCA ATATCATACC
GATGCCAGCC TGCAAAAATT GCACGCGAAA GTGCCATTTA TTACGGTATG GGACGACCAC
GAAGTAGCAA ACGATACTTG GCGTGATGGC GCCGAGAACC ACAACGAAGG CGAAGGGGAT
TTTGCGGTTC GTAAAGAAGC CGCACTGCAG GCTTACTTCG AGTGGCTGCC AATCCGTCCA
TGGCGCGAGG GTAACCATGA GGAGATTTAT CGCAGCTTCA GTTACGGCAA CTTAGTTGAC
TTACATATGC TGGATACGCG CGTTTTGGCC CGTGATAAGC AGCTCGATTA TGCCGATTAT
ATGGATGCCA GTACGGGCGC CTTCGATGGC GAGCGTTTCC GCGCCGATGT GACATCGACT
TCGCGCACTA TGTTAGGTCT GACCCAGTTA CTCTGGTTAC AGGGCACCTT ATTGCAAGCC
ACGGGCACTT GGCAGGTATT AGGACAACAG ATCCTCATGG GCAAAATGTC TCTACCTGCG
GCGATTGCTA CCCAGCAGAT GAGCATTCCA CAATATGCCA TGCTTGGGGC GCTGGCGAAG
TTAGCCGCCC GCGCTGCGGC AAATGACCCA ACCCTAACGG CGGCGGAATT ACAGTACTTG
CAGGCCAATC AAGCCCTGTT AACGCCAGAA GTGATTGCCC TGCTGCAACT GCCATCAATT
CCCTATAACT TGGATGCATG GGATGGTTAT GCCTATGAAA GGGAAGTGAT TTTAGGTACA
GCTAAATCGA AAAATCACAA CCTAGTGGTG ATTGCCGGTG ACACCCATAA TGCCTGGGCG
AATGAGCTTA AAGATGTCAA CGGCGATACC GTAGGGGTCG AGTTTGCCAC AAGCTCAGTG
TCATCACCAG GTTTGGAATA TTACTTAAAT CTACCAGCAG AACAGATCCC CGCGACCGAG
GCGGCGATCG TCGAGTTGGT GCCAGATCTT AAATACACCA ACCTCAAAGA TCGCGGCTTT
ATGACTTTAA CCTTCACCAA GGAAGCGGTG CGTAGCGACT GGCATTATGT CAGCACGATT
CTCGCGAAGG AGTTTGAAGA GTCGAGTAGC CGCAGCTACA GCGCCATGAC TAAGGTCGGT
GAACCTATTA TCAACCCTGT GAGCTAA
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| Protein sequence | MKRTVTRRDF LAMSAKGIGA AVISYGLMGC SDSDDDKSVP AQFLHGVASG DPAQDAVILW
TRVTPDSAGD VKVSWQVASD AAFSQLVTTG EMVTNANRDY TVKIDARGLR AGQTYFYRFM
TGGKTSEVGK TRTLPEGDVS SVKLAVMSCA NFPAGYFNVY ELAAAQDDLD AVVHLGDYIY
EYARGGYASE HAAELGREVL PANELLTLSD YRTRYGQYHT DASLQKLHAK VPFITVWDDH
EVANDTWRDG AENHNEGEGD FAVRKEAALQ AYFEWLPIRP WREGNHEEIY RSFSYGNLVD
LHMLDTRVLA RDKQLDYADY MDASTGAFDG ERFRADVTST SRTMLGLTQL LWLQGTLLQA
TGTWQVLGQQ ILMGKMSLPA AIATQQMSIP QYAMLGALAK LAARAAANDP TLTAAELQYL
QANQALLTPE VIALLQLPSI PYNLDAWDGY AYEREVILGT AKSKNHNLVV IAGDTHNAWA
NELKDVNGDT VGVEFATSSV SSPGLEYYLN LPAEQIPATE AAIVELVPDL KYTNLKDRGF
MTLTFTKEAV RSDWHYVSTI LAKEFEESSS RSYSAMTKVG EPIINPVS
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