| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3283 |
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| Symbol | |
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| ID | 4253850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3917918 |
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| End bp | 3918589 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 638119922 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_735407 |
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| Protein GI | 113971614 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.335218 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAGA TAAAAGTGGC AATTGCTGAT GATCATCCAT TATTTCGTAC AGCCTTAACG
CAAGCTGTTC TCAAGAATGT GAATACGGCG GATGTATTAG AAGCAGAAAA CTTTCAAGAA
TTAATTACGC TCGTTGAGAA TAATCCTGAT ATTGAACTGA TCTTTCTCGA TTTACATATG
CCCGGCAATG AGGGCTTTAC TGGCTTAACT CTACTACAGA ATCATTTTCC CGATATCGCG
GTGATCATGG TGTCCTCCGA TGACCAGCCC GAAATTATTC GTAAAGCCAT TAACTTTGGC
GCCAGTGCTT TTATCCCCAA ATCTGCCAGC TTAACCCAGA TCTCCACCGC CATTGCCACT
GTGCTCGAAG GGGAAGTCTG GCTACCGGAA CACACAGATA TCAACGTCGA TCAGCAAACC
GCTGCCGAGC ATCAACGTTT AGCGAAGCAA CTGGCGCAAT TAACCCCACA GCAGTACACA
GTACTGGCCA GCATTGCCAA TGGACGCTTA AACAAGCAGA TCGCCTATGA TCTTGATATT
AAAGAGACCA CGGTTAAGAA ACACGTATCG GCGATACTGG TTAAACTCGA AGTCTACAAC
CGCACTCAGG CAGGCTTAGT CTTCCAACAG TTGATGATAA CCAGCAACGA TAAACCGCCG
ATCAACGCCT AA
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| Protein sequence | MSQIKVAIAD DHPLFRTALT QAVLKNVNTA DVLEAENFQE LITLVENNPD IELIFLDLHM
PGNEGFTGLT LLQNHFPDIA VIMVSSDDQP EIIRKAINFG ASAFIPKSAS LTQISTAIAT
VLEGEVWLPE HTDINVDQQT AAEHQRLAKQ LAQLTPQQYT VLASIANGRL NKQIAYDLDI
KETTVKKHVS AILVKLEVYN RTQAGLVFQQ LMITSNDKPP INA
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