| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3273 |
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| Symbol | |
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| ID | 4253841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3906364 |
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| End bp | 3908055 |
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| Gene Length | 1692 bp |
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| Protein Length | 563 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119913 |
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| Product | hypothetical protein |
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| Protein accession | YP_735398 |
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| Protein GI | 113971605 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1315] Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00316716 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTGGCCC CTGAACTTCT TGAGCTAAGC AGTGATAAAA CCAAGGCGGA ATTACGCTTG
ATTCCGAATG AACATGGGCC CATCACCCGT GAGGATGTGA TGCGTTTATT ATCCGTGCCT
GAGTTTGCCG CCCTATTCCC CCTCGAGCCT GCGATAGATA AAGTTATCGC GCAAACCAAT
TCTCTATGCC ATCAAGAAGA TGGTAAATAC GAGCTATTTG CCGTATTGGC AGAGCGCCGC
GATGGCAGCG TAAAAATCGA GCTCAGCCAA GATAAAATGC AAGCCACCAT GATCTTAACC
GCCCCTTGGG GAGGTAAAGC CGTCGATTTA CCCGAAATCC TCACGCAGCT TAAAAAAGAC
AATGTTTGCA TGGGCTTAAG TAAGCTTAAG ATCCAAACCT TGCTGCAAAA AATGACCAAG
TTAAAACCGG GTGAAAGCTG CCAGAGTGAA ATCGCTCAAG GTAAGGCCGC GATCAATGGT
CAAAATGCGG TGCTGGAGCG TAAGGTTTCC CTCGCCCGTG AACGCCTATT GCAGCCGCAG
GAGCGGGAAG ACGGCACAGT GGATATGCGC AACCTTGGCG CAATGATCAT GGTCAAGCCC
AACGATCTGC TAATGATTAA GCATCCCGCG ACCGAAGGTT CTCCCGGCTA TAACATTAAA
GGCGAAGTCC TTAAGCAAAA ACCGGGGAAA GATCTGGTGC TACAACCCGG TACTGGTACC
GACTTCCACC CGAAAGATCC CAATAAACTC ATCGCCACAG TGGCAGGCCA ACCCGTTGAA
ACCCGCACAG GCATGAATGT CGATGACGTG CTTCAGCTGA AAGATGTGGA TATCAGTACC
GGCCATATCA ACTTTAAAGG CAGTATTTTA ATCACGGGCG ATGTGCACGA AGGCATGATG
GTTAAAAGCT CAGGCGATAT TACCGTGATG GGCTTTGTCG ATTCTGCGAC CCTTGAGGCC
GATGGCGATA TTACGGTGAG CAAGGGCGTG ATTGGCCGCC AAGTCAGGGT GAATGAGTTC
TCCACCAATA TCACGGCTCA GGGGCAGATC AGCGCCCAAT TCGTGCAATA TTCCCAGTTA
ACGGCCAAGG GTAATATTCT GATCACTAAG CAATTACTCC ACAGTAATAC CAAAACCGCA
GGCACGCTCA CAGTGAGCGA TCAGAGTGGC CGCCGTGGTG ACTTAGTGGG TGGTGTCGTG
CATGCCGAAA AGGGCCTCAC CGCCGTCGTC ATTGGCGCAA CCGCAGGCAC TAAAACCGAG
GTGTACTGCG CCATGGAACA GGGCGAACTC AAGCAAAACC TCAAGCAGTT GGAGGAGAGC
GTGCATGCAA TGGTGGTGGC GACGCTGGAT ATCGAGGCTC GCCTGAAAAA ACTGCCGCCG
AAATCCGAAT GGCAGAGTGA CCCTATCATG ATCGAACAGA TCAAGATGAT GCTCGATGAG
AAGAATCGCA TCTTAGCTGA ACGTTCCCGT GAAGAATTAG AATTCGATAG CCTCAAACAG
GAGGTTGAAC ACTACTATGA CAAGTATCGT ATCGATGTGA TAAAGCACGT ATTCCTCAAT
GCCGAGTTCC ATATTGGTCA AGCCAATCAC AGAAGCACTC GCGAACACGG TACTTGCTCA
ATCACCAATC TTAATCAAGA GATTAACTTC GATTACAACG CAAAACCTAA GGCGCAAGCG
GCAAGCCATT AA
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| Protein sequence | MLAPELLELS SDKTKAELRL IPNEHGPITR EDVMRLLSVP EFAALFPLEP AIDKVIAQTN
SLCHQEDGKY ELFAVLAERR DGSVKIELSQ DKMQATMILT APWGGKAVDL PEILTQLKKD
NVCMGLSKLK IQTLLQKMTK LKPGESCQSE IAQGKAAING QNAVLERKVS LARERLLQPQ
EREDGTVDMR NLGAMIMVKP NDLLMIKHPA TEGSPGYNIK GEVLKQKPGK DLVLQPGTGT
DFHPKDPNKL IATVAGQPVE TRTGMNVDDV LQLKDVDIST GHINFKGSIL ITGDVHEGMM
VKSSGDITVM GFVDSATLEA DGDITVSKGV IGRQVRVNEF STNITAQGQI SAQFVQYSQL
TAKGNILITK QLLHSNTKTA GTLTVSDQSG RRGDLVGGVV HAEKGLTAVV IGATAGTKTE
VYCAMEQGEL KQNLKQLEES VHAMVVATLD IEARLKKLPP KSEWQSDPIM IEQIKMMLDE
KNRILAERSR EELEFDSLKQ EVEHYYDKYR IDVIKHVFLN AEFHIGQANH RSTREHGTCS
ITNLNQEINF DYNAKPKAQA ASH
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