| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3250 |
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| Symbol | |
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| ID | 4253818 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3883686 |
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| End bp | 3884918 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119890 |
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| Product | hydrogenases, Fe-only |
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| Protein accession | YP_735375 |
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| Protein GI | 113971582 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4624] Iron only hydrogenase large subunit, C-terminal domain |
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| TIGRFAM ID | [TIGR02512] hydrogenases, Fe-only |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.644479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000163586 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGCGA CAACTTATCA ACCGGGAGAA ATCCAAGGGC TGATCAAGAT AAATGCATCC
AAATGCAAAG GATGTGATGC TTGCAAACAG TTCTGCCCGA CCCATGCCAT TAATGGCGCC
TCGGGTGCTG TGCACTCTAT CGATGAAGAT AAATGCTTAA GCTGCGGCCA ATGTTTAATT
AACTGCCCCT TTAGCGCCAT TGAAGAAACC CACAGCGCCC TTGAAACCGT CATTAAAAAG
CTCGCCGATA AAAATACTAC CGTTGTCGGC ATTATCGCTC CGGCGGTGCG GGTCGCAATT
GGTGAAGAAT TCGGTCTAGG CACGGGCGAA CTCGTGACGG GTAAGCTCTA TGGTGCGATG
AATCAGGCAG GTTTTAAGAT TTTCGACTGT AACTTTGCCG CCGATCTCAC CATCATGGAA
GAAGGCAGTG AGTTTATTCA TCGCCTCCAT GCCAATGCCA AAGGTGAAGA AAATGCAGGT
GCGCTGCCGC AGTTCACCTC CTGCTGCCCA GGTTGGGTGC GTTACCTCGA AACCCGCTAT
CCTGCGCTAC TGCCTAACCT GTCCACCGCT AAATCTCCCC AACAAATGGC AGGTACGGTC
GCTAAAACCT ACGGTGCTAA GGTGTATCAA ATGCAGCCAG AGAATATTTT CACCGTCTCT
GTGATGCCTT GTACCTCGAA AAAACTCGAA GCCTCACGCC CCGAATTTAA CTCGGCTTGG
CAATACCATC AGGAACATGG GGCTAACACG CCTTCGTACC AAGATATTGA TGCTGTGTTG
ACCACAAGGG AAATGGCTCA ATTGCTCAAA ATGCTCGATA TCGATCTCGC TAATACCCCC
GAATATCAAG GCGATAGTTT GTTCTCTGAA TACACTGGCG CGGGCACTAT CTTTGGTACC
ACAGGTGGCG TAATGGAAGC GGCATTACGT ACCGCTCACA AGGTGCTCAC AGGCACTGAA
ATGGCTAAGT TGGAATTTGA ACCCGTACGC GGGCTAAAAG GCGTCAAATC GGCTTCTGTC
AGCCTGTTTG ATACAGAGCT CAACCAGAAT GTAACCGTCA ATGTCGCTGT AGTACACGAC
ATGGGCAACA ACATCGAACC CGTGCTGCGC GATGTAATGG CAGGCACCTC GCCCTATCAT
TTTATCGAAG TGATGAACTG CGCTGGCGGC TGCGTCAACG GTGGAGGCCA ACCTATTGAA
GGTAAAGGCT CTTCTTGGCT TGGTAACATT TAA
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| Protein sequence | MTATTYQPGE IQGLIKINAS KCKGCDACKQ FCPTHAINGA SGAVHSIDED KCLSCGQCLI
NCPFSAIEET HSALETVIKK LADKNTTVVG IIAPAVRVAI GEEFGLGTGE LVTGKLYGAM
NQAGFKIFDC NFAADLTIME EGSEFIHRLH ANAKGEENAG ALPQFTSCCP GWVRYLETRY
PALLPNLSTA KSPQQMAGTV AKTYGAKVYQ MQPENIFTVS VMPCTSKKLE ASRPEFNSAW
QYHQEHGANT PSYQDIDAVL TTREMAQLLK MLDIDLANTP EYQGDSLFSE YTGAGTIFGT
TGGVMEAALR TAHKVLTGTE MAKLEFEPVR GLKGVKSASV SLFDTELNQN VTVNVAVVHD
MGNNIEPVLR DVMAGTSPYH FIEVMNCAGG CVNGGGQPIE GKGSSWLGNI
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