Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3244 |
Symbol | |
ID | 4253812 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3874020 |
End bp | 3874694 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119884 |
Product | putative hydroxylase |
Protein accession | YP_735369 |
Protein GI | 113971576 |
COG category | [S] Function unknown |
COG ID | [COG3128] Uncharacterized iron-regulated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0054374 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00000245191 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTTATTG AAATTCCGAA TGTTTTTTCT AAAGAAGAAG TCAATCAGCT AAGGGAAGAG CTCGATGCCC GCACTTGGAT TGATGGCAAT CAGACCTCGG GCGTGATGGC GAGTACCCGC AAACGTAACC AACAGTTAGA CAAAGATGAC CCTGTCGCAC TCCAAATCGG CGAGCTGATC ATGGCGCGCT TGTTGGCCCA CCCTTTATTT GTGTCGGCGG CGCTGCCATT ACAGTTTTAT CCTCCTTTGT TTAATCGTTA TCAAGGTGGC GAAACCTTTG GCTATCATAT CGATAACGCG ATTCGCTCGA CGAGCGAAGG CATGGTACGC ACCGATCTCT CGGCCACCTT ATTTTTAAGT GAACCAGACA CTTATCAAGG CGGTGAGCTG GTGATCCAAG ATACCTATGG CCAGCAAAGC ATAAAGCTCG CGGCGGGTTC ATTGGTGCTA TACCCTTCGA CGAGCTTGCA TCAAGTCACT CCTGTCACCT CGGGTGAACG TACCGCTGCT TTTATGTGGC TGCAGAGTAT GGTGCGCGAT GAGGGGCAGC GCCGCTTGCT ATTTCAACTC GATCAATCGA TTCAAGCGCT GACGGCGCAG GCCGCATCAG AACAAGAGTT GTTTAATCTG ACGGGTGTTT ACCATAACTT GCTCAGACGT TGGAGCGAGT TGTAG
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Protein sequence | MLIEIPNVFS KEEVNQLREE LDARTWIDGN QTSGVMASTR KRNQQLDKDD PVALQIGELI MARLLAHPLF VSAALPLQFY PPLFNRYQGG ETFGYHIDNA IRSTSEGMVR TDLSATLFLS EPDTYQGGEL VIQDTYGQQS IKLAAGSLVL YPSTSLHQVT PVTSGERTAA FMWLQSMVRD EGQRRLLFQL DQSIQALTAQ AASEQELFNL TGVYHNLLRR WSEL
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