Gene Shewmr4_3244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3244 
Symbol 
ID4253812 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3874020 
End bp3874694 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content51% 
IMG OID638119884 
Productputative hydroxylase 
Protein accessionYP_735369 
Protein GI113971576 
COG category[S] Function unknown 
COG ID[COG3128] Uncharacterized iron-regulated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0054374 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000245191 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCTTATTG AAATTCCGAA TGTTTTTTCT AAAGAAGAAG TCAATCAGCT AAGGGAAGAG 
CTCGATGCCC GCACTTGGAT TGATGGCAAT CAGACCTCGG GCGTGATGGC GAGTACCCGC
AAACGTAACC AACAGTTAGA CAAAGATGAC CCTGTCGCAC TCCAAATCGG CGAGCTGATC
ATGGCGCGCT TGTTGGCCCA CCCTTTATTT GTGTCGGCGG CGCTGCCATT ACAGTTTTAT
CCTCCTTTGT TTAATCGTTA TCAAGGTGGC GAAACCTTTG GCTATCATAT CGATAACGCG
ATTCGCTCGA CGAGCGAAGG CATGGTACGC ACCGATCTCT CGGCCACCTT ATTTTTAAGT
GAACCAGACA CTTATCAAGG CGGTGAGCTG GTGATCCAAG ATACCTATGG CCAGCAAAGC
ATAAAGCTCG CGGCGGGTTC ATTGGTGCTA TACCCTTCGA CGAGCTTGCA TCAAGTCACT
CCTGTCACCT CGGGTGAACG TACCGCTGCT TTTATGTGGC TGCAGAGTAT GGTGCGCGAT
GAGGGGCAGC GCCGCTTGCT ATTTCAACTC GATCAATCGA TTCAAGCGCT GACGGCGCAG
GCCGCATCAG AACAAGAGTT GTTTAATCTG ACGGGTGTTT ACCATAACTT GCTCAGACGT
TGGAGCGAGT TGTAG
 
Protein sequence
MLIEIPNVFS KEEVNQLREE LDARTWIDGN QTSGVMASTR KRNQQLDKDD PVALQIGELI 
MARLLAHPLF VSAALPLQFY PPLFNRYQGG ETFGYHIDNA IRSTSEGMVR TDLSATLFLS
EPDTYQGGEL VIQDTYGQQS IKLAAGSLVL YPSTSLHQVT PVTSGERTAA FMWLQSMVRD
EGQRRLLFQL DQSIQALTAQ AASEQELFNL TGVYHNLLRR WSEL