Gene Shewmr4_3237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3237 
Symbol 
ID4253805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3868825 
End bp3869520 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content48% 
IMG OID638119877 
Producthypothetical protein 
Protein accessionYP_735362 
Protein GI113971569 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000795933 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000110881 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCCACTT CTGCCCAAGC GGCTACTGTG GTTGGATTCA AAATTGGTGG TGATTACTGG 
CGCGCCGATA CCAGCGGTAC TTTTGCCGAC AAAGGTCAAC CACAACAAGG TTTTGACTAC
AGCTCATCGG CACAAGGCAG CTATTGGGTT GCGGTTGAGC ATCCGCTGCC ATTTATCCCC
AATCTTAAAA TTCGTGAAAA TAGCTTAGAT CAGAAGGGGA GTCTGACGAA TGCAGACTTT
ACCTTCAATG GTCATGATTT TACTGGCAAT GTGACCAGCT ATACCGATCT GAGCAATACC
GATTTTGTGC TGTATTACGA GTTGCTGGAT AACGACATTC TGTCTTTGGA TCTCGGTGCC
GCCTACAAGC TGATGAACGG CTCTCTGCGC GTTCAAGACG CTGGCCATCC TGAAGAGAAA
GATGTCGATA GCGGCATTGT GATGGGTTAT GCCAGCACAC ACGTGAGCAT GCCTGGCCTA
GGTTTATTCG GTTTTGCGGA TTTAATGCTT GGGGTAAACG AGTCTAACGT ACATGACTAT
GCCATCGGCT TAGGCTGGGA GTTTGACGGT GTGGCTGTGG ATACCCGTGT GCGCGTTGGT
TACCGTGAGT TTGCCTTTGA TGTGAATAAT TTCTCTGGCA TCAGCGCCGA TACTAAGTTT
GACGGTTATT TCGCGGGTGT AGAAATTGAT TTCTAA
 
Protein sequence
MATSAQAATV VGFKIGGDYW RADTSGTFAD KGQPQQGFDY SSSAQGSYWV AVEHPLPFIP 
NLKIRENSLD QKGSLTNADF TFNGHDFTGN VTSYTDLSNT DFVLYYELLD NDILSLDLGA
AYKLMNGSLR VQDAGHPEEK DVDSGIVMGY ASTHVSMPGL GLFGFADLML GVNESNVHDY
AIGLGWEFDG VAVDTRVRVG YREFAFDVNN FSGISADTKF DGYFAGVEID F