Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3237 |
Symbol | |
ID | 4253805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3868825 |
End bp | 3869520 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119877 |
Product | hypothetical protein |
Protein accession | YP_735362 |
Protein GI | 113971569 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0000000795933 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0000110881 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCCACTT CTGCCCAAGC GGCTACTGTG GTTGGATTCA AAATTGGTGG TGATTACTGG CGCGCCGATA CCAGCGGTAC TTTTGCCGAC AAAGGTCAAC CACAACAAGG TTTTGACTAC AGCTCATCGG CACAAGGCAG CTATTGGGTT GCGGTTGAGC ATCCGCTGCC ATTTATCCCC AATCTTAAAA TTCGTGAAAA TAGCTTAGAT CAGAAGGGGA GTCTGACGAA TGCAGACTTT ACCTTCAATG GTCATGATTT TACTGGCAAT GTGACCAGCT ATACCGATCT GAGCAATACC GATTTTGTGC TGTATTACGA GTTGCTGGAT AACGACATTC TGTCTTTGGA TCTCGGTGCC GCCTACAAGC TGATGAACGG CTCTCTGCGC GTTCAAGACG CTGGCCATCC TGAAGAGAAA GATGTCGATA GCGGCATTGT GATGGGTTAT GCCAGCACAC ACGTGAGCAT GCCTGGCCTA GGTTTATTCG GTTTTGCGGA TTTAATGCTT GGGGTAAACG AGTCTAACGT ACATGACTAT GCCATCGGCT TAGGCTGGGA GTTTGACGGT GTGGCTGTGG ATACCCGTGT GCGCGTTGGT TACCGTGAGT TTGCCTTTGA TGTGAATAAT TTCTCTGGCA TCAGCGCCGA TACTAAGTTT GACGGTTATT TCGCGGGTGT AGAAATTGAT TTCTAA
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Protein sequence | MATSAQAATV VGFKIGGDYW RADTSGTFAD KGQPQQGFDY SSSAQGSYWV AVEHPLPFIP NLKIRENSLD QKGSLTNADF TFNGHDFTGN VTSYTDLSNT DFVLYYELLD NDILSLDLGA AYKLMNGSLR VQDAGHPEEK DVDSGIVMGY ASTHVSMPGL GLFGFADLML GVNESNVHDY AIGLGWEFDG VAVDTRVRVG YREFAFDVNN FSGISADTKF DGYFAGVEID F
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