| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3227 |
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| Symbol | |
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| ID | 4253795 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3856521 |
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| End bp | 3857585 |
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| Gene Length | 1065 bp |
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| Protein Length | 354 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 638119867 |
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| Product | outer membrane porin, putative |
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| Protein accession | YP_735352 |
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| Protein GI | 113971559 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000101033 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.000000540368 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAAGA ATCTGCTCGC TACAGCGATT GCCGCTAGTC TCGCATTTTG CTCATTTAGC
TCTCAGGCCG ATGGCCCAGA GTTTTACGGC CATGTCGATC TGAGTATCAC CGACTCAGAG
AAAGGCTATG CCGCTCAAAA TCAGAAAGAT GGCACAGTAC TCGAAAACAA CTTTACTTGG
GTTGGTGTTA AAGGTTCAGA AAGCGTTAGT CCATACTTCG ATATCATTTA TCAAATGGAG
TTTGGCGTAG AAAACTTTGA TAACTCAAAC AAAACCTTTA ATGCGCGTAA TACCTTCCTC
GGAGTACGAA GCGTTGCGGG TACCGTTTTA GTCGGCCGTA ACGATACGGT ATTTAAAGCG
TCCGAAGGCG GTTTTGATTT GTTTGGTAAC ACCAACGCCG ATATCGACCT GTTACTGGCA
GGCCAAACTC GCTCTGCTGA TGGTATTTCC TATTATTCGC CTAAGATCGC CGATCTTATC
ACCCTCAACG CCACTTATTT GATGAGTGAT AACTATGATC AACGCGATAG CCAAGGTAAC
GAGGTCTACA GCCAAGATCA AATGTATGCC TTAAGCGCTA CATTAGGGGA TAAGACCTTA
AAAACCCATA ATTACTACGT TGCTGCGGCC TATAACGATG GTATCGATAA TATTGAAGCC
TACCGCGGTG TCGCCCAAGC AAAATTTGGC GATTTCCTCT TTGGCGCCAT TTATCAGCAC
AGCGAGCATA TTGACGACAG ATTCTCAAAC CTCTCAGGTG ATACCTATTT TGTCAATGCC
GCCTATCTGA TGGATGATTT GAAACTGAAG TTAGTTTACG GTAAGGATGA CTCAGGTTTA
GGTAAATATG TCAGCCGCAT GGTCGGCAGC CAAGACAGCG CCAATCTTGA ACAAGTGAGT
GATGTGGACC TACAGCAGCT CACTTTAGGC GCAGACTACC GACTTAGCAC TAAGACTATG
GTCTATGGTC ACTACACTCG CTTCGACGGC GACCTTATGC TAGCCGGTAC AAAACAAGAC
CTAGACGACA ACCTATTTAC AGTAGGTTTA CGTATTGATT TTTAA
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| Protein sequence | MKKNLLATAI AASLAFCSFS SQADGPEFYG HVDLSITDSE KGYAAQNQKD GTVLENNFTW
VGVKGSESVS PYFDIIYQME FGVENFDNSN KTFNARNTFL GVRSVAGTVL VGRNDTVFKA
SEGGFDLFGN TNADIDLLLA GQTRSADGIS YYSPKIADLI TLNATYLMSD NYDQRDSQGN
EVYSQDQMYA LSATLGDKTL KTHNYYVAAA YNDGIDNIEA YRGVAQAKFG DFLFGAIYQH
SEHIDDRFSN LSGDTYFVNA AYLMDDLKLK LVYGKDDSGL GKYVSRMVGS QDSANLEQVS
DVDLQQLTLG ADYRLSTKTM VYGHYTRFDG DLMLAGTKQD LDDNLFTVGL RIDF
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