Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3220 |
Symbol | |
ID | 4253788 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3848620 |
End bp | 3849108 |
Gene Length | 489 bp |
Protein Length | 162 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638119859 |
Product | hypothetical protein |
Protein accession | YP_735345 |
Protein GI | 113971552 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.000000447728 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACCACAG TATTGAGTTC TCTCAAGGTA ATCGCTCGCC CTGAAATTGC CCCTAAGCCA CCTGTGCTCG GCAAACGGAT GAAGTTACTC GACAAGCTAG ACCAGCAATT GTCTCTAGCC GAATGCATGA TTGAAGGCCG TGAATTTGAA GCCTACAAAG AGCGCTCGGT TAAAGACCCA GAGACTGGTG AGCGTAAGAA AATTCGCCGC CGTTACATCG TCCGACCTTG GTTCTATGAC AGCAACGAGC ACTACTACTT TGAAGTGCGA ATTAGTAACA AACCCATCGA ACTGGAAAAA GGTTGCCCTG CTATTGATGT GGGTGAAAAG GCCAACTTGC CAGCGGTAAT TAAGGTGCTG ATTGATGCCG TGGAGAAAGG CGAGTTAGAC GAGCAGTTAC TCGCCCCCGC ACCCAAGATA GGCAAGAAGG CTAAAACCGA TAAGACGTCA GCTAACACCG AGAAACAGAC CACCAAACCA AGTAAGTGA
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Protein sequence | MTTVLSSLKV IARPEIAPKP PVLGKRMKLL DKLDQQLSLA ECMIEGREFE AYKERSVKDP ETGERKKIRR RYIVRPWFYD SNEHYYFEVR ISNKPIELEK GCPAIDVGEK ANLPAVIKVL IDAVEKGELD EQLLAPAPKI GKKAKTDKTS ANTEKQTTKP SK
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