Gene Shewmr4_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3220 
Symbol 
ID4253788 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3848620 
End bp3849108 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content49% 
IMG OID638119859 
Producthypothetical protein 
Protein accessionYP_735345 
Protein GI113971552 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000447728 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCACAG TATTGAGTTC TCTCAAGGTA ATCGCTCGCC CTGAAATTGC CCCTAAGCCA 
CCTGTGCTCG GCAAACGGAT GAAGTTACTC GACAAGCTAG ACCAGCAATT GTCTCTAGCC
GAATGCATGA TTGAAGGCCG TGAATTTGAA GCCTACAAAG AGCGCTCGGT TAAAGACCCA
GAGACTGGTG AGCGTAAGAA AATTCGCCGC CGTTACATCG TCCGACCTTG GTTCTATGAC
AGCAACGAGC ACTACTACTT TGAAGTGCGA ATTAGTAACA AACCCATCGA ACTGGAAAAA
GGTTGCCCTG CTATTGATGT GGGTGAAAAG GCCAACTTGC CAGCGGTAAT TAAGGTGCTG
ATTGATGCCG TGGAGAAAGG CGAGTTAGAC GAGCAGTTAC TCGCCCCCGC ACCCAAGATA
GGCAAGAAGG CTAAAACCGA TAAGACGTCA GCTAACACCG AGAAACAGAC CACCAAACCA
AGTAAGTGA
 
Protein sequence
MTTVLSSLKV IARPEIAPKP PVLGKRMKLL DKLDQQLSLA ECMIEGREFE AYKERSVKDP 
ETGERKKIRR RYIVRPWFYD SNEHYYFEVR ISNKPIELEK GCPAIDVGEK ANLPAVIKVL
IDAVEKGELD EQLLAPAPKI GKKAKTDKTS ANTEKQTTKP SK