Gene Shewmr4_3202 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3202 
Symbol 
ID4253772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3822348 
End bp3823601 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content39% 
IMG OID638119843 
ProductDNA-cytosine methyltransferase 
Protein accessionYP_735329 
Protein GI113971536 
COG category[L] Replication, recombination and repair 
COG ID[COG0270] Site-specific DNA methylase 
TIGRFAM ID[TIGR00675] DNA-methyltransferase (dcm) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000000317903 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000000251181 
Fosmid HitchhikerNo 
Fosmid clonabilityunclonable 
 

Sequence

Gene sequence
ATGTATCAGC AGCTAGTTGA ACACATACAA AACGAACTTG CAGTACTGCG CAGTCCTGTA 
AAAGATGAGG AGCTTCAAGC AAAGGTAACT CATTATCTTC TAAATCCAAA TCACGCATAT
GGGCTATCTG ATAACGACAA ATCAGCTATA AACCAATTTG TTAATGAGTT TTGCTCACAG
CAAAAAATAA CATTTGACCA AATTAAGAAC GAATTTATCA GATATGCTCA AGAGAGAGAG
CACTTTAAAT TTATTGATTT ATTTGCTGGA ATTGGTGGCT TTAACTTGGC ATTAACCAGC
CAAGGTGGCA AAGCAGTATT TTCGTCGGAA TGGGATAAAT CAGCAAAGAT TACGTATTTT
AATAACTACG GTAAAACACC TTTTGGGGAT ATAAACCAAT TCACAGCTCA AGGTGTTAGC
AACGAATTTA TTGAGACAAT GATACCAGAT CATGACGTCT TAGCGGGTGG ATTTCCATGC
CAACCTTTTA GTCACGCAGG GGTATCGGCT AGATCTGCAT TAGGTTTAGC ACATGGGTTC
GATTGTGAAA CTCAAGGCAC ACTCTTTCAT TCCATCGCTC GTATTGCGTT TGTAAAACAA
CCCAAAATTG TCTTCATGGA AAACGTTAAG AATATAGTTT CACATAACAA TGGCGAAACA
TTTTCGGTCA TAAAAGAGAC AATGGAAAAT TTAGGACAAG AGGCTGAGGG TAAACAATCT
TATAGGTTCT ACTATAAGTT GGTGAATTCC GAGACGTTGG TAGCACAGAG AAGAGTAAGA
TGCTTTATGG TCTGCGTTAG GGAGGATGTT TTTCAAGAAT TTGGGGCATT CAAGTTTCCT
GAGTTTGAAG GAGAGCCAAT ACCACTTCGG GATGCGCTAG AAGAACTTAC GGCAGAATTA
ATGGAAGAAT ACACAATATC TGACCGTTTA TGGGAAGGCC ATATCAATCG GACTCAAAGG
AATTTGGACA GAGGAACGGG TTTTACTGCA CATGTAGCGG ATTTGAATAG ACCATCAAAT
ACTATCGTAG CCAGATACGG TAAAGATGGA AAAGAATGCT TAATCCCCCA AGATGGACGT
AACCCTAGGA AACTCACAAT CAAAGAGTGT GCGAATCTAT TTGGTTACCC TGAAAACTTT
TGGGTTCCAA GCTCTAAGAC ACCAGCTTAC AAACAATTTG GTAACTCAGT AGTCGTACCT
GTTGTATCAC GAATTTCATC AGAGATTGTT CAACAATACG GGCTTAATCA GTGA
 
Protein sequence
MYQQLVEHIQ NELAVLRSPV KDEELQAKVT HYLLNPNHAY GLSDNDKSAI NQFVNEFCSQ 
QKITFDQIKN EFIRYAQERE HFKFIDLFAG IGGFNLALTS QGGKAVFSSE WDKSAKITYF
NNYGKTPFGD INQFTAQGVS NEFIETMIPD HDVLAGGFPC QPFSHAGVSA RSALGLAHGF
DCETQGTLFH SIARIAFVKQ PKIVFMENVK NIVSHNNGET FSVIKETMEN LGQEAEGKQS
YRFYYKLVNS ETLVAQRRVR CFMVCVREDV FQEFGAFKFP EFEGEPIPLR DALEELTAEL
MEEYTISDRL WEGHINRTQR NLDRGTGFTA HVADLNRPSN TIVARYGKDG KECLIPQDGR
NPRKLTIKEC ANLFGYPENF WVPSSKTPAY KQFGNSVVVP VVSRISSEIV QQYGLNQ