| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3184 |
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| Symbol | |
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| ID | 4253754 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3803397 |
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| End bp | 3805982 |
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| Gene Length | 2586 bp |
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| Protein Length | 861 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 638119825 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_735311 |
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| Protein GI | 113971518 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.162767 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.00577733 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAAGAC CTCAGATTCT ACCCAGTGCT TGTGCTATCG CGATCGCAAT GGCATTTGCC
CCGAATATTA GCTATGCAGC CGATAACGGC GCTGACAAAG TTGAACGCAT TGAAGTAACG
GGCTCTCGTA TTAAGCGCAC TGATATCGAG GGACCGTCAC CCATTCAATC CATTGGCAAA
GAAGATATTG CCAACATGGG GTTTGACAAC CTGCAACAGT TACTTGAACG TATGCCTGCC
AACGGTGCTG GCGCTTTCTC TACCCGTGGG AACAGCCAAG ACTCGACCGC AAACGGTGGT
GCTTCAATCA GTTTGCGTGG CTTAGGCCCT GACGCCACTC TGGTATTGAT TAACGGTCGC
CGTGTTGCGG CAAGTGCCTT TGCTGAAGGT ATCACTAACT CCTTCGTCGA CATTAACAAC
ATTCCGGTTT CAGCGATTGA ACGCATTGAT ATTCTGAAAG ATGGTGCGTC GGCGATTTAT
GGTTCCGATG CGATTGCGGG CGTAGTCAAC ATCGTCTTGA AAAAAGACAT CGAAGGGATT
GAGGTTAACT TAGGTTACGG CGATACCCCG GGTACGGGTT ACGATGAAAC CACGGCAAGT
ATCGTTTGGG GCGTGAAGTC CGAAAAGGGT AGTGCGTCGG TTATTCTCGA TTATTTTAAA
AACGATACCT TAGCGGCAAC CGATTTGGGC CGTTTTGGCA CAGCCGATCA AAGCCCTTAC
GGTGGTGAAG ATTTCCGTTC CTCACGCGGT TTCCCCGGTT ATTTTTATGT CGATGGTGTG
AAGACAATCG ATCCATCCTG TCCGCCCGAT CGTGCAACGG CCAGCGGCAG CTGTTTATTT
GACTATGGTC CATACAACTT AGTGATCCCT GAGGCTGAGC GTATTGGGGC TATTGGTCAA
TTCGATTACC ATTTCAATGA CGATTTAACC GCTTTCCTCG AGTTAGCCGC GCAACATAAC
TCTTCAATTG CGGGTGGTGC ACCAACACCT TTGGATGAAG ATGCGGCCTT AACTGTGCCA
GGCACTCACC CAAATAATCC TTGGGGCAAA GATATCGAAA TCGGTCGTTT CCGTACTGTG
GATGCGGGCG CTCGCCGTTG GGATATCGAG TCCGACACCC TACGTTTAGT GGCGGGTTTA
CGTGGCACGA TTAAAGAGTG GGATTGGGAA GCCTCGGTAC AACGTGGCCG CAGTGAATCG
ACACAAACGG GCGATCGTAC TCAAGGTTGG GTCAGAACCG ATTACCTGCA AGCCGAGATC
GATGCGGGTC GCTACAATCC TTTTGGCGGC ACCATGAACT CGCAGGATGT GATCGATGCG
ATTACGACTA GCCTAGTTCG CCAAGGTTTA TCGAGCATGA CGTCATACGC GGCGAACATT
TCTGGCCAAG CGTTCACACT GGCGGACCGC GATATTATGA TGGCGGCGGG CGTGGAATAC
CGTGAAGAAA GCGTGAGCGA CGTGCCGGAT GAACAGTTCC AACGTGGGCT GATTTTCGGT
ACCGAAGCGG TTTCAGCTGC GGCCTCCCGT GACCAATACG CAGGTTATGT GGAGTTCTCT
ATTCCTGTCA CGGATAACTT TGAGCTGCAA CTCGCGGGTC GCTACGACCA CTACAGCGAT
TTTGGTTCAA CCACTAACCC TAAAGTGGCG TTCCAATGGG GCATCACCGA TGAGCTGACG
AGCCGTGGTT CTTGGTCAAC GGGTTTCCGC GCGCCTTCAT TAGCACAAAT TGGTTTAGGC
CCATCACGCG AAAGTAGCTT CTTTATCGAT ACTTATCGCT GCGCCGCCGA TGGTGTGGAT
TGTGAAGCGC TCGACTACAA CACTGAATTC CAGGGTAACT CTGAGTTGGA TGCCGAAGAG
TCAGAAACAT GGAACCTTGG ACTTATCTGG GCGCCAAGCC AGAAGTTTGA TATCGGGTTC
GATGTTTACA GCATCACTCA AGATAACAAG ATCGATAAGC AGCCATTGGG TGATATCTAC
ACCGCAAACT GTAACGATCA AAACAGCACA GTGTGTGAGC GTTTAGTACC GCAAGCGGGT
CAAACCTTAG GTCCTATCAG CATTATTCAC TCAAGCTTTA TCAACTTAAG CTCGCAGGAT
GTGCAGGGTG TTGACCTGTC AACCCACTAT GGTCTTGAGC TAGATAGCTT TGGTGATTTG
AAGTTTGGCC TAGAGTACAG CTACTTACAT AACTTCGAAA AAGACGGTCT CGATTACACT
GGCGAGTACA AGTTCCCACA ACATCGCTGG TTACTCACCA CCAACTGGAC CATGGATAAC
TTCGCCGCCA ACGTAAACCT GAGTTACATC GGTGAGTTCG AAGATACTCC TGATATCGAC
TTTGACGGTG TGTTAGACTT CGAAACGAAC AAGTCTCGTA TGGTTGATGC TCAGTTATTA
GTCGATATGT CAGGTAGTTA CCGTTTCAAC GAGATGTTTA AGCTGACATT AGGCGTGAAC
AACCTATTCG ATGAAGAGCC ACCTTTTGCG ATTGGTGACG GCGATACCGA CCTCTATGGT
TATGTGATTT CTGTACATAA CCCAATGGGA CGTTATATCT ACACTAAACT GACCATGAAC
TTCTAA
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| Protein sequence | MKRPQILPSA CAIAIAMAFA PNISYAADNG ADKVERIEVT GSRIKRTDIE GPSPIQSIGK
EDIANMGFDN LQQLLERMPA NGAGAFSTRG NSQDSTANGG ASISLRGLGP DATLVLINGR
RVAASAFAEG ITNSFVDINN IPVSAIERID ILKDGASAIY GSDAIAGVVN IVLKKDIEGI
EVNLGYGDTP GTGYDETTAS IVWGVKSEKG SASVILDYFK NDTLAATDLG RFGTADQSPY
GGEDFRSSRG FPGYFYVDGV KTIDPSCPPD RATASGSCLF DYGPYNLVIP EAERIGAIGQ
FDYHFNDDLT AFLELAAQHN SSIAGGAPTP LDEDAALTVP GTHPNNPWGK DIEIGRFRTV
DAGARRWDIE SDTLRLVAGL RGTIKEWDWE ASVQRGRSES TQTGDRTQGW VRTDYLQAEI
DAGRYNPFGG TMNSQDVIDA ITTSLVRQGL SSMTSYAANI SGQAFTLADR DIMMAAGVEY
REESVSDVPD EQFQRGLIFG TEAVSAAASR DQYAGYVEFS IPVTDNFELQ LAGRYDHYSD
FGSTTNPKVA FQWGITDELT SRGSWSTGFR APSLAQIGLG PSRESSFFID TYRCAADGVD
CEALDYNTEF QGNSELDAEE SETWNLGLIW APSQKFDIGF DVYSITQDNK IDKQPLGDIY
TANCNDQNST VCERLVPQAG QTLGPISIIH SSFINLSSQD VQGVDLSTHY GLELDSFGDL
KFGLEYSYLH NFEKDGLDYT GEYKFPQHRW LLTTNWTMDN FAANVNLSYI GEFEDTPDID
FDGVLDFETN KSRMVDAQLL VDMSGSYRFN EMFKLTLGVN NLFDEEPPFA IGDGDTDLYG
YVISVHNPMG RYIYTKLTMN F
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