Gene Shewmr4_3180 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3180 
Symbol 
ID4253750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3800593 
End bp3801378 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content49% 
IMG OID638119821 
Producthypothetical protein 
Protein accessionYP_735307 
Protein GI113971514 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0594296 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.121226 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGT TATTTCGTAC CTTTTTTATC TTTCTACTCT TATTATCGAC CCGCACAGGC 
GTAGCCAATC CTTTAGATAT CAATGACAGC AGAGCCGAAC GCGGTAATTA CAGTGCAAGA
CAGGCTCAAA GCCATGATCT GCATGGTCTT TATGCGCTAA ACACTCAAAC CTTCGACACC
CCACGTCAAG CTTCGGCCTG TTTAGACAAC TTATATTCCA ATGCCCACGC GGCCCAAAAT
GAACTCGCAA GCCTGTTGCA GACAGTGGCT GCCAGTTCAC AGGCGCAGGT GATTTTGCCT
GACGTAAAAA GTTATCAACG CGCCGCCGAG AAGGTCGCCA CCAAATTTAA TGGGGATGCA
AGCCAGATCA CCGACCTTGC CCGCGCCAGC ATCGTCAGTA ACAGTATCTC CGAGCTGATG
CAAAGCTATT ACGCCTTAAG CGAGCAAGCT CAGGTCGTGA AACAGAAAAA CCGTTTCGCC
GAACCTAAAG CCTCAGGTTA TCGCGACCTT AACTTACTGG TACGTTTGCC CGAAAGCGGC
ATGATTGCCG AGGTCCAATT ACACCTTAAG GATATTGCCG ACATCAAAAG CGGCCCAGAA
CACAAGGTTT ACGAACAGGT TCAACAGATT GAGGCGAACG CGATCAAACA GCAACGGGGG
TTAAGTGAGT TTGAAACCGC GCAGATCGCT AAGCTGCGCC AAGAGTCACA TAAGCTGTAT
CACAAAGCTT GGCTTAACTA TAAACGCGTC GATGAGGGAT TGCTGCTCAC TAACTCAGTT
GCTTAA
 
Protein sequence
MNKLFRTFFI FLLLLSTRTG VANPLDINDS RAERGNYSAR QAQSHDLHGL YALNTQTFDT 
PRQASACLDN LYSNAHAAQN ELASLLQTVA ASSQAQVILP DVKSYQRAAE KVATKFNGDA
SQITDLARAS IVSNSISELM QSYYALSEQA QVVKQKNRFA EPKASGYRDL NLLVRLPESG
MIAEVQLHLK DIADIKSGPE HKVYEQVQQI EANAIKQQRG LSEFETAQIA KLRQESHKLY
HKAWLNYKRV DEGLLLTNSV A