Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3180 |
Symbol | |
ID | 4253750 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3800593 |
End bp | 3801378 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 638119821 |
Product | hypothetical protein |
Protein accession | YP_735307 |
Protein GI | 113971514 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0594296 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.121226 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAAGT TATTTCGTAC CTTTTTTATC TTTCTACTCT TATTATCGAC CCGCACAGGC GTAGCCAATC CTTTAGATAT CAATGACAGC AGAGCCGAAC GCGGTAATTA CAGTGCAAGA CAGGCTCAAA GCCATGATCT GCATGGTCTT TATGCGCTAA ACACTCAAAC CTTCGACACC CCACGTCAAG CTTCGGCCTG TTTAGACAAC TTATATTCCA ATGCCCACGC GGCCCAAAAT GAACTCGCAA GCCTGTTGCA GACAGTGGCT GCCAGTTCAC AGGCGCAGGT GATTTTGCCT GACGTAAAAA GTTATCAACG CGCCGCCGAG AAGGTCGCCA CCAAATTTAA TGGGGATGCA AGCCAGATCA CCGACCTTGC CCGCGCCAGC ATCGTCAGTA ACAGTATCTC CGAGCTGATG CAAAGCTATT ACGCCTTAAG CGAGCAAGCT CAGGTCGTGA AACAGAAAAA CCGTTTCGCC GAACCTAAAG CCTCAGGTTA TCGCGACCTT AACTTACTGG TACGTTTGCC CGAAAGCGGC ATGATTGCCG AGGTCCAATT ACACCTTAAG GATATTGCCG ACATCAAAAG CGGCCCAGAA CACAAGGTTT ACGAACAGGT TCAACAGATT GAGGCGAACG CGATCAAACA GCAACGGGGG TTAAGTGAGT TTGAAACCGC GCAGATCGCT AAGCTGCGCC AAGAGTCACA TAAGCTGTAT CACAAAGCTT GGCTTAACTA TAAACGCGTC GATGAGGGAT TGCTGCTCAC TAACTCAGTT GCTTAA
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Protein sequence | MNKLFRTFFI FLLLLSTRTG VANPLDINDS RAERGNYSAR QAQSHDLHGL YALNTQTFDT PRQASACLDN LYSNAHAAQN ELASLLQTVA ASSQAQVILP DVKSYQRAAE KVATKFNGDA SQITDLARAS IVSNSISELM QSYYALSEQA QVVKQKNRFA EPKASGYRDL NLLVRLPESG MIAEVQLHLK DIADIKSGPE HKVYEQVQQI EANAIKQQRG LSEFETAQIA KLRQESHKLY HKAWLNYKRV DEGLLLTNSV A
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