Gene Shewmr4_3162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3162 
Symbol 
ID4253732 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3781439 
End bp3782311 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content48% 
IMG OID638119803 
Producthypothetical protein 
Protein accessionYP_735289 
Protein GI113971496 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGGATTT TCTTTACCTT ATTAGCCGCA TTTATGCAGG CGTGGCGCAA TGCCTTTCAG 
AGCCAACTGA GTAAAGAGGT TAAGGTGGCG GGCGTTACCT TAGCGCGGTT TATTTGGGCT
GGTCCGATTG CGGCCTTGTA TCTTGGGTTG TTATATCTTT GGGACAATGT GGGGTTACCG
CATTTTACGG CGGAATTTAT CGGCTTTATT GTCGGTGCAT CTATGATGCA GATCCTCGCG
ACTGGCTTGA TGGTTAAGTT GTTCCAACAA CAAAATTTTG CCATCGGTGC CGGGCTTGCC
AAGAGTGAGG CCATTGTTGC TGCGATATTA GGCACCTTCT TTTTTGGCAC CCATTTATCG
TTACTCGGTT GGATTGGGGT GATTTTAGGT GGCGTTGCCG TGTTTTTATT GAGCGCCAAG
CAAGGGCTTA GGCAGTTATC CCTAAGCACA GTGCTGCTCG GCATTGCTAG CGGCAGCGCC
TTTGCACTGA CTTCTTTGTG GGTGAGGGAA GCAAGCCTAA GGCTAAATGT CGGCTTTCCC
CATAGCGCCG CTTGGGTATT GCTTTTGGTG ATATGTCTAC AAACCATAGT GTTAGTCAGT
TATTTAGTCC TAAAGGATAA GGAAACGTTA AGCGCCTTAA TCCAACGTCC TAAGTTAACC
TTGCTGACGA GTACCGCCAG CTGCTTTGGC TCCATTGGTT GGTTTAGTGC CATGTCTTTG
CAGGCCGTGC CCTATGTTAA AACCCTAGGG CAAGTGGAAA TCTTCTTTAT GATGCTGATT
TCGGCATTCT GGCTAAAGGA ACGAGTAAAA ATAAAAGAAA TGTTTGGCCT AGTGCTGATT
GCGGTCGCAG CAATTCTTGT GATGTGGGAG TGA
 
Protein sequence
MWIFFTLLAA FMQAWRNAFQ SQLSKEVKVA GVTLARFIWA GPIAALYLGL LYLWDNVGLP 
HFTAEFIGFI VGASMMQILA TGLMVKLFQQ QNFAIGAGLA KSEAIVAAIL GTFFFGTHLS
LLGWIGVILG GVAVFLLSAK QGLRQLSLST VLLGIASGSA FALTSLWVRE ASLRLNVGFP
HSAAWVLLLV ICLQTIVLVS YLVLKDKETL SALIQRPKLT LLTSTASCFG SIGWFSAMSL
QAVPYVKTLG QVEIFFMMLI SAFWLKERVK IKEMFGLVLI AVAAILVMWE