| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3133 |
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| Symbol | |
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| ID | 4253704 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3751287 |
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| End bp | 3752450 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 638119775 |
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| Product | twin-arginine translocation pathway signal |
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| Protein accession | YP_735261 |
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| Protein GI | 113971468 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2355] Zn-dependent dipeptidase, microsomal dipeptidase homolog |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCTG TCAATCAAGA TCGTCGAACG CTGTTAAAAG GGATTGGCGC CGCCACGCTA
CTTTGCCCCT TTGCCAGTTT CTCCAGCCTT GCAGCGCCGC GCTCTCGGCG CTTATATATA
GATGGTTTAT CCTTTCTGCC CGATGACTTA GCCGATGTTC CCGCATCGGG GCTCGATGCC
TTTTTATGTG ATATCTCTGC CATCGAAACC ATTGAACAAG CCGATGGCAC CTTAAACTAC
AAACGCACTT ACAAAGCCTG TATGGAAAGC ATCCAGCAAG CCGCGAAACG CGTCAGCGAA
CACTCAGACA TTCTCCTACA AGGCTTAACT GGACGCGATA TCAAACTGGC AAGAGAGAGC
AATCGCACCG CGGTTTTCTT CCAGATCCAA GGCGCGGATT GCGTGGAAGA AGACAGCGAG
GCCAACCAAT GGGCCCGTGT CGATGAGTTT CACCGCCAAG GTCTGCGAGC ACTGCAGCTG
ACCCACCATT ACGGCAATAC CTTTGCGGGC GGCGCCCTCG ATAACGATGC CAATGGCGGG
CTCAATAAAC CTCTTACCGC CCATGGTCGT GCACTGATTG AAAAACTCAA TCATGCCAAT
ATCTTAGTCG ATGTCAGCCA CTCGAGCGCC CAAACCGCGT TAGATGCTGC CAAACTCAGC
CGCGCGCCCA TAGTCCAAAG CCATGGCGCG GCGCGCGGTA TTGTCAAACA TGCCCGTTGT
AGCCCCGATG AAGTGATCCG CGCCATTGCC GACTCAGGCG GCGTATTCGG GGTCTTTATG
ATGAGCTTTT GGCTCACCAA TAATGCCGTT CCAACTGTCG ATGATTATAT CCGCCAGTTA
GAATATGTCA CCCGTATCGG CGGGGTCGAT TGTGTTGCCA TCGCCAATGA TTATCCGCTC
AGAGGCCAAG AAAATCTGTT AGCCCTGAAT AACGACAATG CCCAGGGCGT GAAGGAATAT
CAGGAATGGT GGTACAGCCT AAGGGCTAAG CAAGTGTTAG GTTTTGATGC CGAACCAAGG
CATGTGGTGA TTCCCGAGCT AAACCATATC GAGCGTATGA GCCGTATCGA CGATGCATTA
GCTAAGGCCC GTTTTAAGTC GACCGATCGC GACCGCTTTA TGGGCGGAAA CTGGCAAAGA
GTGCTCAATC AGGTACTCAT CTAA
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| Protein sequence | MKAVNQDRRT LLKGIGAATL LCPFASFSSL AAPRSRRLYI DGLSFLPDDL ADVPASGLDA
FLCDISAIET IEQADGTLNY KRTYKACMES IQQAAKRVSE HSDILLQGLT GRDIKLARES
NRTAVFFQIQ GADCVEEDSE ANQWARVDEF HRQGLRALQL THHYGNTFAG GALDNDANGG
LNKPLTAHGR ALIEKLNHAN ILVDVSHSSA QTALDAAKLS RAPIVQSHGA ARGIVKHARC
SPDEVIRAIA DSGGVFGVFM MSFWLTNNAV PTVDDYIRQL EYVTRIGGVD CVAIANDYPL
RGQENLLALN NDNAQGVKEY QEWWYSLRAK QVLGFDAEPR HVVIPELNHI ERMSRIDDAL
AKARFKSTDR DRFMGGNWQR VLNQVLI
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