Gene Shewmr4_3110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3110 
Symbol 
ID4253681 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3722567 
End bp3723544 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content52% 
IMG OID638119752 
Producthypothetical protein 
Protein accessionYP_735238 
Protein GI113971445 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00498184 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGGAA TGCTAATGCG GGTTCTCACG TCGATACTCA TTTTGGCCGC GACCTTATCG 
CTTACGGGTT GTGGCGATGA CAGGCCAGAG AAAATTGAGA AGTATCAACA ACTCACTCAG
CAGCGCCTCT CGACACTCAA TACTATGCTT GAGGACGGTC AGGTACGTAA CGCTAATCTG
CTCAAGCAAT ATAGCAGTTT GCTCAAACAG CAAAAGCCCG ATTTTGCGCC ACTCTTGGAT
GAATTAGCCA AGGATTCCAC CGCCGAAGGG CCAATGTATA CGTCGCTGAA GCGCCGCTTA
GACGATGCCA AAAACTCGGC TAACTTTACC GATCTCGACC AGCAACTCGC CGAGGTTGAG
AATCTCTATC AAGCGGCCGA TCCCAGCCTG TATAACGACA TGCTTTCCGA TCCCGTCAAC
GTGATTGCCG ATATGTCGGA TGGCAAGCTT GCCCGCGTTA ATGCCATCAG TCGTGAAGCG
GCAGCCCTTG CCAATAATGC CGAAGATTTT GGCCCTGGTA GCCAATTGGT GGGTAACCCT
GCTTACGGCA GCTGGCAGAC AGACTCGAGC GGCATGTCTT TCTGGGCTTG GTACGGCATG
TATTCGATGT TTTCGAATAT TTTCCACCGC CCCATTTATT ACGACCGTTG GTCGGGTAAC
CGTGGCTACA GCTATTACAA CGACGTAGGT CGCTATCGCT ATACCTCGCC AAAACAAGCA
CAGGCGCAGG AAAAAACCTT CGAGCAGACC AAAAAACGTT TCGATTCTCA AGGGAAACGC
TTCGACAGCC CCTATTCAAA ATCGCGCACG GGTGCCACGG CTCTCTCCCG TGAGAGCAGC
AGCGCGCCTA AAACCAATAC CACAGCGAAT AAGTCGAGCG CGCAGTCGGG CAGCAAATTC
CGCTCAAATT ATTCTAAAGA CAGCAGTTTC CGTAATTCCA GCAACCGCAC GACCCGCAGT
GTGCGCCGAG GCAAGTAA
 
Protein sequence
MAGMLMRVLT SILILAATLS LTGCGDDRPE KIEKYQQLTQ QRLSTLNTML EDGQVRNANL 
LKQYSSLLKQ QKPDFAPLLD ELAKDSTAEG PMYTSLKRRL DDAKNSANFT DLDQQLAEVE
NLYQAADPSL YNDMLSDPVN VIADMSDGKL ARVNAISREA AALANNAEDF GPGSQLVGNP
AYGSWQTDSS GMSFWAWYGM YSMFSNIFHR PIYYDRWSGN RGYSYYNDVG RYRYTSPKQA
QAQEKTFEQT KKRFDSQGKR FDSPYSKSRT GATALSRESS SAPKTNTTAN KSSAQSGSKF
RSNYSKDSSF RNSSNRTTRS VRRGK