Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_3109 |
Symbol | |
ID | 4253680 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3719451 |
End bp | 3722315 |
Gene Length | 2865 bp |
Protein Length | 954 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119751 |
Product | bifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase |
Protein accession | YP_735237 |
Protein GI | 113971444 |
COG category | [O] Posttranslational modification, protein turnover, chaperones [T] Signal transduction mechanisms |
COG ID | [COG1391] Glutamine synthetase adenylyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.038583 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTAC AAAAAGACAG TAATAAGTCA TTGTCTCCCC TCATTACCCA AGCTTCAGAT CGTCATTGGG CACGCCTCGC CGAAGTATGG TCAGAAGGTC TGGCAAATTT AACGCCTGCG CAGCAGCAAG AACTGAAAAA CGTTTTAGGA TTAAGCGATT ATATCGCAGC GCAGTTAACT CGGTCACCCG AGTGGATTAA CACTTTATTC GCAGGCGATC TACAGCAAGT GGAGCGGCAG ACCTTTGATG CCCAGCTACA CGAACAGTTA AATAGTGCGA CGACTGAAGA CCTCGCAAAA CGTCAATTAC GTCGATTCCG TAACTATCAA ATGGTGCGTT TAGCCTGGCG AGATTTTTTA GATTACGCCA GCTTAGAAGA ATCACTGCTG GACCTCTCGG CACTCGCCGA AGCGTTGGTG ATTGGTGCAA GGGATTGGCT CTATAAAGAA ATGTGTGCCC AATATGGCAC GCCTATGGAT AAGGCGGGCA ACCCGCAGCC TTTGCTTATC TTGGGCATGG GCAAGCTCGG TGGGCGTGAG CTTAACTTCT CCTCCGATAT CGACCTTATC TTTACCTTCC CCGAACATGG CGAAACTGTG GGGGGGCGCC GAAGCCTCGA TAATCAACAG TTTTTCATCC GTATGGGGCA GCGGCTAGTT AATTTACTCG ACCAAATTAC TGTCGATGGG TTTGTGTTCC GCGTCGACAT GCGCCTGCGT CCCTACGGCG AAAGTGGTCC ATTGGTGGTG AGTTTTAGTG GCCTTGAGGA TTATTACCAA GAGCAAGGGC GGGATTGGGA ACGCTATGCC ATGGTTAAAG CCCGTTCGCT CGGACCTTGG AACCATTTTT CCGACGAATT ACACAGCTTG CTGCGCCCCT TTGTTTATCG CCGTTATATC GACTTCTCGG CGATTGAATC TCTGCGCAAA ATGAAACAAC TCATTGCCCA AGAAGTGCGT CGCCGTCAGT TAACCGACAA TATTAAACTC GGTGCGGGCG GGATACGTGA GGTGGAGTTC GTGGTGCAAA GCTTTCAGCT GATCCGCGGC GGTCGTGAAC CCGCCCTGCG CCAGCAGAGC CTATTTGGGG CCATGGATAC CCTTTACAGC CTAGGTCAAT TCGAATACTT AGCGGTCGAT GAGCTAAAAC ACAGCTACTT ATTACTGCGC CGAGTCGAGA ACCTGTTACA GGCGATTGAT GATAAGCAAA CCCAGACACT GCCAAATAAT CCCCTCGATT GGGCAAGACT TTGCGCAGTG CTGGATATGA CCAACGAAAC CGATCTTCGC ACCCATATCG AGGCGGCGAT GGCGAAAATT CATCGCCATT TTAAAGCCAC AGTGGGCGGT GAAGAAGGGG AGGAGAAAGC CGAGCATTGG ACTGCGCAGC TGTGGAATGT GCAGCAGGAC GACCACGCGA TTAACCTCCT CGCCGAGCAG CAGATTGACG ACGATAAACT CTGGCCGCTG CTCAGCAGTT GGCGTGACAC CGTGACTAAA CGCTCGATTG GCCCCCGTGG TCGTGAGACC CTCGATAAAT TAATGCCAAG GTTGCTGGAC GAGTTACTCA ATCAGCCGAG CCCTTCAGCG GCCTTCGAGC CTGTCTCAAA GGTGCTAGAG CAAATTCTGA CGCGCACGAC CTATCTTGAG TTACTGTGCG AAAACCCCGG CGCACGGCAA CAGCTTGTGA GCCTGTGCTG CGCCAGTCCT TGGATTGCGG CGCAGCTTGC TAAATTCCCG ATGTTGCTCG ATGAGCTTAT CGACCCTGCG CATCTGTACG ATACAACCTC GCTTGATGAT TACCCCAGTG AGCTACGCCA ATATCTGCTG CGAGTACCTG AGGATGATAT GGAGCAGCAA ATGGAGGCGC TGCGTCAGTT TAAGTTGTCA CAACAGCTGA AAATTGCTGC CGCCGATGTG ACAGGCGTTT TACCTGTGAT GCAGGTGAGT GACCACTTAA CCTTCTTGGC CGAAGCCATT ATCGAGCAAG TGGTTATGCA GGCATGGCAA CAAGTGGCGG TGCGTCATGG TGTGCCCAGT TATCTTGAAG AAGGCAACGA CACCGGCTTT GCGGTCATAG GCTATGGCAA GTTAGGCGGT ATCGAATTGG GTTACGGTTC GGATCTGGAT TTAGTTTTCC TCTACGAAGC GCCCGAAAAT ATGGCCAACA GCCTTACCAA TGGCGATAGA CCGATAGAAG TGGGTCATTT TTATTTGAAA CTGGCTCAAC GTATTTTGCA CTTATTCTCG ACCCGAACCA CCTCGGGTGA GTTGTATGAA GTGGATATGC GCCTGCGTCC GTCTGGCGCA TCGGGCTTAA TGGTGAGTGA GATTGCGCGC TTTGGTGAGT ATCAAGCGCA GGAGGCCTGG ACATGGGAAC ATCAAGCCTT AGTGCGCTCA CGTTTTGTTT TTGGCGATAA TAGTTTAGCG GCTAAATTTA GCCAGATCCG CGCCTCTGTG CTTGAGCAAT CAAGGGACAA GGACGAGCTG AAAAAGGCCG TGCGTGAGAT GCGCCAAAAG ATGCGTGACC ATTTACTTAA AGTCAGCGAA GGTGAATTCG ACTTAAAACA GAGCCCCGGC GGGATCACGG ATATTGAGTT TATCGCCCAA TATTTAGTGC TTGCTCACGC ACATGAGTAT CCCGAATTGT CGATTTGGTC TGATAACGTG CGTATTTTTG GTGTGCTGGC AGAGCTTGAG CTTTTGCCGC TCATGAGCGC GCAGCATTTG ACTCAGAGTT ATTGCTGGCT ACGGGATGAA AATCATCGTC TCACCCTGCA ACAAAAAGCC GGTAAGTTGG CCTTTGATGA TGTGGCTGCC CACGCGGAGA GAGTGGTTGT GATTTATCAG GCAATCCTTG AGTAA
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Protein sequence | MAVQKDSNKS LSPLITQASD RHWARLAEVW SEGLANLTPA QQQELKNVLG LSDYIAAQLT RSPEWINTLF AGDLQQVERQ TFDAQLHEQL NSATTEDLAK RQLRRFRNYQ MVRLAWRDFL DYASLEESLL DLSALAEALV IGARDWLYKE MCAQYGTPMD KAGNPQPLLI LGMGKLGGRE LNFSSDIDLI FTFPEHGETV GGRRSLDNQQ FFIRMGQRLV NLLDQITVDG FVFRVDMRLR PYGESGPLVV SFSGLEDYYQ EQGRDWERYA MVKARSLGPW NHFSDELHSL LRPFVYRRYI DFSAIESLRK MKQLIAQEVR RRQLTDNIKL GAGGIREVEF VVQSFQLIRG GREPALRQQS LFGAMDTLYS LGQFEYLAVD ELKHSYLLLR RVENLLQAID DKQTQTLPNN PLDWARLCAV LDMTNETDLR THIEAAMAKI HRHFKATVGG EEGEEKAEHW TAQLWNVQQD DHAINLLAEQ QIDDDKLWPL LSSWRDTVTK RSIGPRGRET LDKLMPRLLD ELLNQPSPSA AFEPVSKVLE QILTRTTYLE LLCENPGARQ QLVSLCCASP WIAAQLAKFP MLLDELIDPA HLYDTTSLDD YPSELRQYLL RVPEDDMEQQ MEALRQFKLS QQLKIAAADV TGVLPVMQVS DHLTFLAEAI IEQVVMQAWQ QVAVRHGVPS YLEEGNDTGF AVIGYGKLGG IELGYGSDLD LVFLYEAPEN MANSLTNGDR PIEVGHFYLK LAQRILHLFS TRTTSGELYE VDMRLRPSGA SGLMVSEIAR FGEYQAQEAW TWEHQALVRS RFVFGDNSLA AKFSQIRASV LEQSRDKDEL KKAVREMRQK MRDHLLKVSE GEFDLKQSPG GITDIEFIAQ YLVLAHAHEY PELSIWSDNV RIFGVLAELE LLPLMSAQHL TQSYCWLRDE NHRLTLQQKA GKLAFDDVAA HAERVVVIYQ AILE
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