Gene Shewmr4_3109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3109 
Symbol 
ID4253680 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3719451 
End bp3722315 
Gene Length2865 bp 
Protein Length954 aa 
Translation table11 
GC content51% 
IMG OID638119751 
Productbifunctional glutamine-synthetase adenylyltransferase/deadenyltransferase 
Protein accessionYP_735237 
Protein GI113971444 
COG category[O] Posttranslational modification, protein turnover, chaperones
[T] Signal transduction mechanisms 
COG ID[COG1391] Glutamine synthetase adenylyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.038583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGTAC AAAAAGACAG TAATAAGTCA TTGTCTCCCC TCATTACCCA AGCTTCAGAT 
CGTCATTGGG CACGCCTCGC CGAAGTATGG TCAGAAGGTC TGGCAAATTT AACGCCTGCG
CAGCAGCAAG AACTGAAAAA CGTTTTAGGA TTAAGCGATT ATATCGCAGC GCAGTTAACT
CGGTCACCCG AGTGGATTAA CACTTTATTC GCAGGCGATC TACAGCAAGT GGAGCGGCAG
ACCTTTGATG CCCAGCTACA CGAACAGTTA AATAGTGCGA CGACTGAAGA CCTCGCAAAA
CGTCAATTAC GTCGATTCCG TAACTATCAA ATGGTGCGTT TAGCCTGGCG AGATTTTTTA
GATTACGCCA GCTTAGAAGA ATCACTGCTG GACCTCTCGG CACTCGCCGA AGCGTTGGTG
ATTGGTGCAA GGGATTGGCT CTATAAAGAA ATGTGTGCCC AATATGGCAC GCCTATGGAT
AAGGCGGGCA ACCCGCAGCC TTTGCTTATC TTGGGCATGG GCAAGCTCGG TGGGCGTGAG
CTTAACTTCT CCTCCGATAT CGACCTTATC TTTACCTTCC CCGAACATGG CGAAACTGTG
GGGGGGCGCC GAAGCCTCGA TAATCAACAG TTTTTCATCC GTATGGGGCA GCGGCTAGTT
AATTTACTCG ACCAAATTAC TGTCGATGGG TTTGTGTTCC GCGTCGACAT GCGCCTGCGT
CCCTACGGCG AAAGTGGTCC ATTGGTGGTG AGTTTTAGTG GCCTTGAGGA TTATTACCAA
GAGCAAGGGC GGGATTGGGA ACGCTATGCC ATGGTTAAAG CCCGTTCGCT CGGACCTTGG
AACCATTTTT CCGACGAATT ACACAGCTTG CTGCGCCCCT TTGTTTATCG CCGTTATATC
GACTTCTCGG CGATTGAATC TCTGCGCAAA ATGAAACAAC TCATTGCCCA AGAAGTGCGT
CGCCGTCAGT TAACCGACAA TATTAAACTC GGTGCGGGCG GGATACGTGA GGTGGAGTTC
GTGGTGCAAA GCTTTCAGCT GATCCGCGGC GGTCGTGAAC CCGCCCTGCG CCAGCAGAGC
CTATTTGGGG CCATGGATAC CCTTTACAGC CTAGGTCAAT TCGAATACTT AGCGGTCGAT
GAGCTAAAAC ACAGCTACTT ATTACTGCGC CGAGTCGAGA ACCTGTTACA GGCGATTGAT
GATAAGCAAA CCCAGACACT GCCAAATAAT CCCCTCGATT GGGCAAGACT TTGCGCAGTG
CTGGATATGA CCAACGAAAC CGATCTTCGC ACCCATATCG AGGCGGCGAT GGCGAAAATT
CATCGCCATT TTAAAGCCAC AGTGGGCGGT GAAGAAGGGG AGGAGAAAGC CGAGCATTGG
ACTGCGCAGC TGTGGAATGT GCAGCAGGAC GACCACGCGA TTAACCTCCT CGCCGAGCAG
CAGATTGACG ACGATAAACT CTGGCCGCTG CTCAGCAGTT GGCGTGACAC CGTGACTAAA
CGCTCGATTG GCCCCCGTGG TCGTGAGACC CTCGATAAAT TAATGCCAAG GTTGCTGGAC
GAGTTACTCA ATCAGCCGAG CCCTTCAGCG GCCTTCGAGC CTGTCTCAAA GGTGCTAGAG
CAAATTCTGA CGCGCACGAC CTATCTTGAG TTACTGTGCG AAAACCCCGG CGCACGGCAA
CAGCTTGTGA GCCTGTGCTG CGCCAGTCCT TGGATTGCGG CGCAGCTTGC TAAATTCCCG
ATGTTGCTCG ATGAGCTTAT CGACCCTGCG CATCTGTACG ATACAACCTC GCTTGATGAT
TACCCCAGTG AGCTACGCCA ATATCTGCTG CGAGTACCTG AGGATGATAT GGAGCAGCAA
ATGGAGGCGC TGCGTCAGTT TAAGTTGTCA CAACAGCTGA AAATTGCTGC CGCCGATGTG
ACAGGCGTTT TACCTGTGAT GCAGGTGAGT GACCACTTAA CCTTCTTGGC CGAAGCCATT
ATCGAGCAAG TGGTTATGCA GGCATGGCAA CAAGTGGCGG TGCGTCATGG TGTGCCCAGT
TATCTTGAAG AAGGCAACGA CACCGGCTTT GCGGTCATAG GCTATGGCAA GTTAGGCGGT
ATCGAATTGG GTTACGGTTC GGATCTGGAT TTAGTTTTCC TCTACGAAGC GCCCGAAAAT
ATGGCCAACA GCCTTACCAA TGGCGATAGA CCGATAGAAG TGGGTCATTT TTATTTGAAA
CTGGCTCAAC GTATTTTGCA CTTATTCTCG ACCCGAACCA CCTCGGGTGA GTTGTATGAA
GTGGATATGC GCCTGCGTCC GTCTGGCGCA TCGGGCTTAA TGGTGAGTGA GATTGCGCGC
TTTGGTGAGT ATCAAGCGCA GGAGGCCTGG ACATGGGAAC ATCAAGCCTT AGTGCGCTCA
CGTTTTGTTT TTGGCGATAA TAGTTTAGCG GCTAAATTTA GCCAGATCCG CGCCTCTGTG
CTTGAGCAAT CAAGGGACAA GGACGAGCTG AAAAAGGCCG TGCGTGAGAT GCGCCAAAAG
ATGCGTGACC ATTTACTTAA AGTCAGCGAA GGTGAATTCG ACTTAAAACA GAGCCCCGGC
GGGATCACGG ATATTGAGTT TATCGCCCAA TATTTAGTGC TTGCTCACGC ACATGAGTAT
CCCGAATTGT CGATTTGGTC TGATAACGTG CGTATTTTTG GTGTGCTGGC AGAGCTTGAG
CTTTTGCCGC TCATGAGCGC GCAGCATTTG ACTCAGAGTT ATTGCTGGCT ACGGGATGAA
AATCATCGTC TCACCCTGCA ACAAAAAGCC GGTAAGTTGG CCTTTGATGA TGTGGCTGCC
CACGCGGAGA GAGTGGTTGT GATTTATCAG GCAATCCTTG AGTAA
 
Protein sequence
MAVQKDSNKS LSPLITQASD RHWARLAEVW SEGLANLTPA QQQELKNVLG LSDYIAAQLT 
RSPEWINTLF AGDLQQVERQ TFDAQLHEQL NSATTEDLAK RQLRRFRNYQ MVRLAWRDFL
DYASLEESLL DLSALAEALV IGARDWLYKE MCAQYGTPMD KAGNPQPLLI LGMGKLGGRE
LNFSSDIDLI FTFPEHGETV GGRRSLDNQQ FFIRMGQRLV NLLDQITVDG FVFRVDMRLR
PYGESGPLVV SFSGLEDYYQ EQGRDWERYA MVKARSLGPW NHFSDELHSL LRPFVYRRYI
DFSAIESLRK MKQLIAQEVR RRQLTDNIKL GAGGIREVEF VVQSFQLIRG GREPALRQQS
LFGAMDTLYS LGQFEYLAVD ELKHSYLLLR RVENLLQAID DKQTQTLPNN PLDWARLCAV
LDMTNETDLR THIEAAMAKI HRHFKATVGG EEGEEKAEHW TAQLWNVQQD DHAINLLAEQ
QIDDDKLWPL LSSWRDTVTK RSIGPRGRET LDKLMPRLLD ELLNQPSPSA AFEPVSKVLE
QILTRTTYLE LLCENPGARQ QLVSLCCASP WIAAQLAKFP MLLDELIDPA HLYDTTSLDD
YPSELRQYLL RVPEDDMEQQ MEALRQFKLS QQLKIAAADV TGVLPVMQVS DHLTFLAEAI
IEQVVMQAWQ QVAVRHGVPS YLEEGNDTGF AVIGYGKLGG IELGYGSDLD LVFLYEAPEN
MANSLTNGDR PIEVGHFYLK LAQRILHLFS TRTTSGELYE VDMRLRPSGA SGLMVSEIAR
FGEYQAQEAW TWEHQALVRS RFVFGDNSLA AKFSQIRASV LEQSRDKDEL KKAVREMRQK
MRDHLLKVSE GEFDLKQSPG GITDIEFIAQ YLVLAHAHEY PELSIWSDNV RIFGVLAELE
LLPLMSAQHL TQSYCWLRDE NHRLTLQQKA GKLAFDDVAA HAERVVVIYQ AILE