| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3079 |
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| Symbol | |
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| ID | 4253650 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3681175 |
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| End bp | 3682872 |
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| Gene Length | 1698 bp |
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| Protein Length | 565 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119721 |
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| Product | sulfite reductase subunit beta |
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| Protein accession | YP_735207 |
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| Protein GI | 113971414 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | [TIGR02041] sulfite reductase (NADPH) hemoprotein, beta-component |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTGAGC AAAAGTTAGC ATTAAACGAA TACCTAAAGA CCGACAGTGA TTATCTGCGT
GGCACCATCA AAGAGGGATT AGATTCCTCG GTGACGGGCA GTTTTAGCGA TGGCGATCAG
CAATTGATCA AATTCCACGG CTTCTATCAG CAGGATGACC GTGATTTACG TAACGAGCGT
AAAGAGCAAA AACTCGAGCC TTTGTATAGC TTTATGTTAC GTGCCCGCGT GCCAGGCGGT
GTGTGTACAC CTAAGCAATG GTTAGGCGTG GATGAAATTG CCTCGACGCT CACCAGCTCT
AACAGCATTC GTTTAACGAC GCGCCAGACG TTCCAATACC ACGGCATTCC AAAGCGTAAT
CTCAAGACCA TTATTCAAGG CTTGGACCGT GAGGCGCTCG ACTCTATCGC CGCCTGTGGT
GACGTTAACC GTAACGTGAT GTGTAACCCG AATCCGGTGG AATCTAAGCT GCATGCGCAG
GCCTATGAAG TCGCGAAAAA GCTGTCTGAT CACCTGCTGC CCCACACTCG TGCCTACGCC
GAGATTTGGT TAGATGAAGA GAAGTTACTG ACCACAGAAG ACGAAACCGT TGAACCTGTA
TACGGCAAAA CCTACTTGCC ACGTAAGTTT AAGATGGCCG TTGCCGTACC GCCGGATAAC
GATGTTGACG TCTACACCAA CGATTTAGGC TTTATTGCGG TGGCTGAAAA TGGCGAATTA
GTCGGTTTTA ACCTGACCGC TGGTGGCGGC ATGGGTTCGA CCCACGGTGA AGTGGAAACC
TTCCCGCGCT TGGCCGATGA CTTTGGTTTC ATCAAAACTG AAGATGTGAT GAAGTTTGCC
GAAGCTGTGA TGACAGTGCA GCGTGACTGG GGTAATCGTA CCAACCGTAA GCGTTCGCGT
CTTAAGTACA CTATCGTTGA CCATGGTTAT GAGAAGTTTA AGGCCGAAGT GGAAGCCCGT
GCTGGCGTCA AGTTTGAGCC CAAGCGCGAT GTGGTGATTG GCGATCGCGG CGATCGTTAC
GGCTGGGTCG AAGGTGTCGA TGGTAAGTGG CATTTAACCC TGTTTATTGA AAGCGGCCGC
ATTAAAGACG TGCCCGGTAA GAGTTTGCAA ACCGGTATGC GTGAAATCGC GAAGATCCAC
AAGGGCGATT TCCGCATGAC CTCAAACCAG AATATGATTA TTGCGGGTGT GGCTCCCGAG
GATAAAGCGA CCATTGAAGG CCTTGCCCGT AAACACGGTT TACTCGGCCA AGTGTTGACC
CAAACTCGCG GTCATTCGAT TGCCTGTGTG GCCTTGCCAA CCTGTCCATT GGCGATGGCG
GAAGCTGAGC GTTATTTCCC TGAGTTTATC GACCATATCG ATGCGCTGCA GGCGAAAAAT
GGTATTAGCG ATCAAGCCAT TGTGGTGCGT ATGACGGGCT GTCCAAACGG TTGCGCACGT
CCATTTGCCG CTGAAATCGG CTTAGTGGGT AAAGCGCCGG GTCGCTACAA CCTGTATCTT
GGGGCGAACT TCGAAGGCAC TCGCCTGAAT AAGATGTACA GAGAGAATAT CCAAGAGGCT
GAGATCCTTG CTGAATTGGA TGCATTATTT GCCCGCTACG CGATTGAGCG TAATGCAGGC
GAAACCTTTG GTAACTTCAC CGTCCGCACG GGCGTAGTGA AGGCGGTTAT CGATGCCGCT
AAGGATTTCC ATGGCTGA
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| Protein sequence | MSEQKLALNE YLKTDSDYLR GTIKEGLDSS VTGSFSDGDQ QLIKFHGFYQ QDDRDLRNER
KEQKLEPLYS FMLRARVPGG VCTPKQWLGV DEIASTLTSS NSIRLTTRQT FQYHGIPKRN
LKTIIQGLDR EALDSIAACG DVNRNVMCNP NPVESKLHAQ AYEVAKKLSD HLLPHTRAYA
EIWLDEEKLL TTEDETVEPV YGKTYLPRKF KMAVAVPPDN DVDVYTNDLG FIAVAENGEL
VGFNLTAGGG MGSTHGEVET FPRLADDFGF IKTEDVMKFA EAVMTVQRDW GNRTNRKRSR
LKYTIVDHGY EKFKAEVEAR AGVKFEPKRD VVIGDRGDRY GWVEGVDGKW HLTLFIESGR
IKDVPGKSLQ TGMREIAKIH KGDFRMTSNQ NMIIAGVAPE DKATIEGLAR KHGLLGQVLT
QTRGHSIACV ALPTCPLAMA EAERYFPEFI DHIDALQAKN GISDQAIVVR MTGCPNGCAR
PFAAEIGLVG KAPGRYNLYL GANFEGTRLN KMYRENIQEA EILAELDALF ARYAIERNAG
ETFGNFTVRT GVVKAVIDAA KDFHG
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