| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3038 |
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| Symbol | |
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| ID | 4253609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3631840 |
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| End bp | 3633240 |
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| Gene Length | 1401 bp |
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| Protein Length | 466 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 638119680 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_735166 |
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| Protein GI | 113971373 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3014] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000055247 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.645895 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAGCA CCTTCATTCA CTCTTTAATC AAACCCACAC TCAGCACGCT GATGCTCGCC
GCGATCTTAG GCTCGAGCGG CTGTGCCTAT AACAGTATTT TTATCAATTA TCCGGCGCAA
ATTGCACCGA TAAAACAAGA ACTCAATACC GCAACGCCCA TGGCGGATAT CGAGAAATTA
GCCAGCAATA TCCAAGGTAA CGATGGCCTA CTCTACGCCC AAGAAGCGGG ACGCGTGGCG
CAGGTTGCAG GGAACTTTGC CAGCAGCCGT AAGTACTACC AGCAAGCGGT CGAGGCCTAT
ACTGCCTTCG ATGATAAAGC CAAGATTAGC GCCAGCGACA TAGGCGCAAC CGCTACAAGC
TTGGTATTAA ACGATAATGC CATCCCCTAC CGTGGCCCAG GCTACGAGCG CATTATGCTG
CACCAATATC AAGCCTTGAA TTACCTGTTC AGCGGTGACT ATCAAGGCGC ATTGGTGGAA
GTTCGCCGCA GTAACGAGCT GCAAGGTTCT GAGCAGGAGC GTTATCAGAA GTCGCAAAAA
TCCGTGCAGG CCATGGCCAA TGGCACCATA GATGCCGAAA TGAATAAGCT CGGCCAAGCC
GCAGGTACGG TAACCAGCTC CTTCCTCAAT GCCTATAGCT ACTACACGAC GGGATTGCTC
CACGAGGTTT TGGGCGAGCC AAACGATGCC TTTATCGACT ATCGTAAAGC GGCGCAAATC
AGCCCAGATA ACACTTATCT GCAACAGGAT TTAGTGCGCC TTGCCAAGCA ACTCGGCATG
CCACAATACG ATGAATTTAA AAAGCGCTGG GGCGATGCCA AGCTTCCCAA GGCGGGTGAA
GGCCAAGTCA TCCTAATGAT CGAAAAGGGC TTCGTACCTG AAAAACAAGC GCTCACAGTG
CCCTTCACTA TCCATGGCAA CTGGCAAACC GTGTCTCTGG CCACCTATGG GCCGAACAAT
AGTGTTGTCG CCGAGACCCA AGTACAAGGC TTAGGTGCAG TGCTGAAAAC CGAGCCCATC
GCCAATATCG ATGCCTTAGC CATTAACGCG CTCAAGGAAG ATTTACCCGG CACCTTGGTT
CGCCAAGTCG CGCGGGTGTA TGCCAAATCG GAAATGGCGT ATCAGGTCGA AAAAAGCGGT
AAGCCCGGCA ACAATGCCGC CGATATTGGC AGTATCGCCA TGCAGATTTT TAACGTGGTC
AGCGAACAGG CGGATCGCCG CAGTTGGTTG ACCCTGCCAA AACAGGCGCA AATTGGTAGA
CGTTACCTTA ATCCCGGGGA ATACACGCTG CAGTTAGACA AGGCACCACC AGCCAAAATT
GAAGTTGCCG CAGGCAAGAC CACCTTGGTC TGGGCAATTG ATACTGGTAA TTACACCCGA
ATTTATTCAA TAATCATTTA A
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| Protein sequence | MNSTFIHSLI KPTLSTLMLA AILGSSGCAY NSIFINYPAQ IAPIKQELNT ATPMADIEKL
ASNIQGNDGL LYAQEAGRVA QVAGNFASSR KYYQQAVEAY TAFDDKAKIS ASDIGATATS
LVLNDNAIPY RGPGYERIML HQYQALNYLF SGDYQGALVE VRRSNELQGS EQERYQKSQK
SVQAMANGTI DAEMNKLGQA AGTVTSSFLN AYSYYTTGLL HEVLGEPNDA FIDYRKAAQI
SPDNTYLQQD LVRLAKQLGM PQYDEFKKRW GDAKLPKAGE GQVILMIEKG FVPEKQALTV
PFTIHGNWQT VSLATYGPNN SVVAETQVQG LGAVLKTEPI ANIDALAINA LKEDLPGTLV
RQVARVYAKS EMAYQVEKSG KPGNNAADIG SIAMQIFNVV SEQADRRSWL TLPKQAQIGR
RYLNPGEYTL QLDKAPPAKI EVAAGKTTLV WAIDTGNYTR IYSIII
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