Gene Shewmr4_3034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_3034 
Symbol 
ID4253605 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3629144 
End bp3629917 
Gene Length774 bp 
Protein Length257 aa 
Translation table11 
GC content43% 
IMG OID638119676 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_735162 
Protein GI113971369 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.94048e-08 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.43479 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCGA TTTATAAATT ATCGTTAGTT GCATTGGCTG TTATTGGCCT ATCTGCTTGT 
AATCAAGAAG AAAAAGCAAC AAATGCAAGC ACAAATGTTG AATTAACGAC TGAAGCACAA
AAAGAAGCCT ACAGTGTTGG CGCTTCAATC GGTCGTTATA TGTCTGGCCA TATCAAAGAG
CAAGAAGAAT TAGGCCTGCC AGTTGACCGT ACGCTGATCG TGACTGGTTT TACTAACGGT
CTGAATGATC AACTGAAATT AACCGAAGAA GAAATGCAAA CCATTCTTCA AGGTTTAGAT
AAAAAGTTAA ACGACAAACG TCAAGAACAA GCGACAGCCA TTGCTGCTAA AAACATCGAG
GAAGGTAAAA AGTTCCTCGA GGAAAACAAA GCTAAGCCAG GCGTTGTGAC CACTGAATCG
GGCCTGCAAT ACGAAGTATT AACGCCAGGT TCTGGTGAAA AGCCAGCGGC TGAAGATACA
GTGGAAGTGG ATTACGTAGG TACTCTGCTT GACGGTACTG AGTTTGATAG CTCATACAAG
CGTGGTCAAA CCGCTAAGTT CCCATTGAAC CGCGTTATTC CAGGTTGGAC CGAAGGCGTA
CAGTTAATGC CTGTTGGCGC TAAGTACAAG TTTGTGATCC CTTCAAACTT AGCTTACGGT
GAGCGCGATA CTGGTACTAT CCCACCAAAC TCAACCCTGA TTTTTGAAGT TGAACTGAAA
TCAATTGAGA AAGCGCAAGC GGCACCAGCT GCAGCTGAGC CTGCTAAAAA GTAA
 
Protein sequence
MKSIYKLSLV ALAVIGLSAC NQEEKATNAS TNVELTTEAQ KEAYSVGASI GRYMSGHIKE 
QEELGLPVDR TLIVTGFTNG LNDQLKLTEE EMQTILQGLD KKLNDKRQEQ ATAIAAKNIE
EGKKFLEENK AKPGVVTTES GLQYEVLTPG SGEKPAAEDT VEVDYVGTLL DGTEFDSSYK
RGQTAKFPLN RVIPGWTEGV QLMPVGAKYK FVIPSNLAYG ERDTGTIPPN STLIFEVELK
SIEKAQAAPA AAEPAKK