| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_3006 |
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| Symbol | |
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| ID | 4253577 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3592874 |
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| End bp | 3593587 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119648 |
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| Product | two component transcriptional regulator |
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| Protein accession | YP_735134 |
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| Protein GI | 113971341 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000324706 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0671955 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGAATC CACAATCACC CCACAGAGTG TTATTGGTTG AAGACGATGT CCGTCTTGCG
AATTTAATCG TAGATTATTT GAAATCCCAC GGCATGCATG TTGAAGTCGA GCGCCGTGGT
GACACTGTCC TAACCCGCTT AATCAACTAC AAGCCAGATA TCATACTGCT AGACATTATG
TTGCCAGGTA TCGATGGCCT GAGCCTATGT GAAAAGCTAC CCGATTACTT TGCTGGCCCC
ATCCTACTGA TGAGCGCTCT AGGTTCGAGC GAAGATCAGA TCAAAGGTTT AGAGCTCGGT
GCCGACGACT ATGTCGTTAA ACCCGTTGAC CCAGCGCTGC TCGTCGCCCG TATAAACAAC
CTATTACGTC GCCAAAATCA ACCGCCTCAG GCCGAATCCC ATTGTCTGAC CTTTGGTAAG
CTGAGTATCG ATCCCCATAC CCATGCAATC CGCCTCGACA ATAAAGAAGT CGACCTCACC
AGCCATGAGT TTGAACTCCT CTGGTTACTG GCCTCACAGG CAGGACAAGT GCTGAGCCGT
CAGTACATCT ATCAATTACT GCTTAACATT GATTTTGATG GTAAAGATAG AAAGATAGAC
GTGCGCATTT CAAGGCTACG TAAAAAGCTG AATGACAATA TCGAGACCCC CTTCAGAATT
AAAACCGTCT GGGGGCAGGG TTATCTCTTC GCCCCAGAGG CTTGGAACAA CTAA
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| Protein sequence | MTNPQSPHRV LLVEDDVRLA NLIVDYLKSH GMHVEVERRG DTVLTRLINY KPDIILLDIM
LPGIDGLSLC EKLPDYFAGP ILLMSALGSS EDQIKGLELG ADDYVVKPVD PALLVARINN
LLRRQNQPPQ AESHCLTFGK LSIDPHTHAI RLDNKEVDLT SHEFELLWLL ASQAGQVLSR
QYIYQLLLNI DFDGKDRKID VRISRLRKKL NDNIETPFRI KTVWGQGYLF APEAWNN
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