Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2974 |
Symbol | |
ID | 4253545 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3552543 |
End bp | 3554315 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119610 |
Product | putative sulfate transporter YchM |
Protein accession | YP_735102 |
Protein GI | 113971309 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0659] Sulfate permease and related transporters (MFS superfamily) |
TIGRFAM ID | [TIGR00815] high affinity sulphate transporter 1 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.117668 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCCAC ACGTGTCACA CTCTGCTCAT TTGTTTTCAT TAAGAATTGC CCACGCCCTT AGCGAGGCGT GCGTAAAAGA TAAATATTCG GTTAAGCGTT TTGGACAAGA TCTACTGGCG GGACTGACCG TCGGGATTAT TGCCATTCCG CTCGCAATGG CACTGGCGAT TGCCAGCGGT GTCGCACCAC AATATGGCCT ATACACCGCC ATTGTCGGTG GTTTTATCAT TGCCATGACG GGCGGCTCCC GTTATAGCGT GTCGGGACCA ACGGCCGCCT TCGTGGTCTT ACTCTATCCC ATCGCCCAGC AATTTGGTTT GGCGGGACTG CTTATTGCCA CCGTAATGTC AGGCATGATG TTGGTTGCCA TGGCCATGCT AAGACTGGGC CGATTAATTC TCTACATACC AGAGTCTGTC ACCTTAGGTT TTACCGCGGG GATTGGAGTG GTGATTGCGA CCTTGCAGCT AAAAGACTTT TTTGGCCTGC ATATAGAGCA CATGCCGGAG CAATATTTTG CCAAACTCAT GGCCTTAGGT CAGGCATTGC CAAGCCTACA CTTGCCGAGC TTGCTAGTAG CCGCAGCCAC CTTAGCGACT ATGCTACTCT GGCCTAAGTT GAAGATGCCT GTGCCAGCGC ATCTGCCCGC AATCGCCTTA GGCAGTATTC TTGCCTTAGT GTTAAATACC ATGGGTGCAG ATATTGAAAC CATAGGGACA CGTTTCCATT ATCAATTAAG CGATGGCAGT GTCGGCACCG GCATACCCGC TGTTTTACCC CACTTTGAAT GGCCATGGTT ACAAACGGGC GCCAATGGCC AAGCCTTTGA ATTTAATCTG GCGACCTTTC AAGCCTTACT CCCTGCCGCC TTCGCGATTG CCATGCTAGG CGCTATTGAG TCGCTACTGT GTGCCGTGGT ACTCGATGGC ATGACGGGAA AACGCCACAG CGCAAACAGT GAACTCCTCG GCCAGGGTAT AGGTAACATT ATTACTCCCT TCTTTGGCGG TATCCCGGCA ACGGCGGCCA TCGCCCGTAG CGCGGCAAAC GTTAAGGCGG GGGCCCAGAG CCCGATAGCA TCGATGATCC ACGCCATTGT GGTATTGATT GGTCTAGTCG CACTCGCAGG GATTTTAGCC TATTTACCCA TGTCGGCCAT GGCTGCATTA TTACTGGTCG TTGCCTGGAA TATGAGCGAG GCGCCTAAAG CGGTGCACTT ACTCAAAACC GCACCCACCA GCGATATCTT AGTGTTTTTA ACCTGTTTTT CACTCACAGT GATTTTCGAT ATGGTGATCG CCATCAGCGT GGGAATTATC TTAGCCGCAC TACTGTTTAT GAAAGAAATA GCCGAGATGA CCAAGCTCTA TGATATCAGC ACCAATAAGC GCTATGTTGA TCAACCACTT CCCGCAGATT GGGCTGTGAT AAAGATTAAT GGGCCATTAT TCTTTGCCGC GGCCGACCGG ATTTTTGCCG AGATAGCGAG CCTTACCCAA GATAAACAAG TGATAGTGCT TTACTTAGAT GGGGTATCAA TTCTCGATGC CGGTGGCCTT GCTGCACTCA ATAAACTCAT TGATAAATGT AAACTTAACC ACACTAAACT GATTGTGGCC GATCTGCAGT TTCAGCCCAT TCGCACCCTA GCGAGGGCCA AGGTGCAACC GATTGAAGGG GTATTGAAGT TTTATCCTAC CCTGCGCGAA GCGTTGGCGG AGGCGCCGGC ACCAGAACTG GCCGTCGAAG CAAGTGCAGC CACTCACTCC TAA
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Protein sequence | MDPHVSHSAH LFSLRIAHAL SEACVKDKYS VKRFGQDLLA GLTVGIIAIP LAMALAIASG VAPQYGLYTA IVGGFIIAMT GGSRYSVSGP TAAFVVLLYP IAQQFGLAGL LIATVMSGMM LVAMAMLRLG RLILYIPESV TLGFTAGIGV VIATLQLKDF FGLHIEHMPE QYFAKLMALG QALPSLHLPS LLVAAATLAT MLLWPKLKMP VPAHLPAIAL GSILALVLNT MGADIETIGT RFHYQLSDGS VGTGIPAVLP HFEWPWLQTG ANGQAFEFNL ATFQALLPAA FAIAMLGAIE SLLCAVVLDG MTGKRHSANS ELLGQGIGNI ITPFFGGIPA TAAIARSAAN VKAGAQSPIA SMIHAIVVLI GLVALAGILA YLPMSAMAAL LLVVAWNMSE APKAVHLLKT APTSDILVFL TCFSLTVIFD MVIAISVGII LAALLFMKEI AEMTKLYDIS TNKRYVDQPL PADWAVIKIN GPLFFAAADR IFAEIASLTQ DKQVIVLYLD GVSILDAGGL AALNKLIDKC KLNHTKLIVA DLQFQPIRTL ARAKVQPIEG VLKFYPTLRE ALAEAPAPEL AVEASAATHS
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