| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2964 |
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| Symbol | |
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| ID | 4253535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3539378 |
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| End bp | 3540844 |
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| Gene Length | 1467 bp |
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| Protein Length | 488 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 638119600 |
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| Product | amino acid carrier protein |
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| Protein accession | YP_735092 |
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| Protein GI | 113971299 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1115] Na+/alanine symporter |
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| TIGRFAM ID | [TIGR00835] amino acid carrier protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.302472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.844283 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTAGAAA CCATTGTAAA CTTTTTGAAC GCACTGCTCT GGGGCAAATT GCTCGTATAC
GGACTGGTGG GTGCGGGTCT TTATTTCACC TTACGACTTG TATTTATTCA AATTACGCAT
TTCAAACACT CTCTTAAAGT GATGACCATG AGCCGTCAAG GTTGCGAGAG TGGTCTGTCT
TCATTTCAAG TCTTTTGTAC TAGTATGGCG GCCCGTGTGG GGGCTGGAAA CATGGCTGGG
GTGGCAGTGG CTATTGGCGC AGCTGGACCT GGCGCTGTAT TCTGGATGTG GCTTATTGCC
ATACTAGGTA TGGCGACGGC TATGGTGGAG TCGACTCTTG CGCAAGTATA TAAGGTGCGT
GACACCAACG GTCAATTCCG CGGCGGCCCT TCCTATTATA TGGAGAAAGG GCTTGGTCAG
AGATGGATGG GAGTGTTGTT TGCTTTCTTC CTGATCATTG CCTTTGGTCT GGTGTTTAAC
GCGGTGCAAG CGAATACCAT TACGGGGGCA ATGGAGCGGG TGTTTGGCTT CAATCCAACC
TATGTGGGTA TAGGCTTAGT GTTAGCCAGT GGCTTTGTGA TTGTCGGTGG ATTACGTAAA
GTTGCTCGAG TGTCTGAGTT TATCGTGCCT ATCATGGCGC TGGCTTATAT TCTGATCGCT
TTCATTATTG TGCTTTTCAA CTTAGAACAA TTACCTGCTG TAATAAGTTT GATTGTAAAG
AGTGCTTTCG GTTGGCAAGA GGCTGCTGCG GGCGGTGTTG CTTATACTGT TGCACAAGCT
ATGCAAGCGG GGATTGCCCG TGGTCTGTTC TCAAACGAGG CGGGGATGGG GAGCGCTGCA
AACGTTGCTG CTAGTGCGTC ACCGAATCCT AACCATCCAG CATCTCAAGG TTTTGTGCAG
ATGATGGGAG TGTTTGTCGA TACCATCGTT ATCTGTACTG CAACTGCGGC AATTATTTTA
CTTTCAGGCG ATATCGGTTC TAGTGAAGAC GGCATTCGTC TCACCATCAA TGCGATGTCA
AACCACGTTG GAGACTGGGG CGGCGCCTTT ATCGCGATAG CCATTTTCCT ATTCTGCTTT
ACCTCTATCA TTGCTAACTA TTCCTACGCG GAAACCAATG TGATGTTCTT GACGGGCAAC
AGCACTAAGG CGTTACCGCT ATTCCGTCTG TGCGTATTGG GCATGGTGAT GTTTGGTGCT
GTAGCCAAAA TCAGCTTAGT GTGGAACTTA GCTGACGTGT CTATGGGGCT GATGGCCACG
GTCAATATCA TTGCATTGCT GTTGCTATCG GGTCTCGCGA TACGGGTTAT TAATGATTAC
TGTGAACAAT TGAAGAGTGG CAAAATGCCT GAGTTCGATC GCAGTAAGTT CCCTGAGCTA
ATGGAACAAC TCGATGATGG TATTTGGCAG GATAATAGTG CTAACGAGCA GGCGAAAACG
CGTACAGAAT CTGCGCTGAG TCGCTAA
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| Protein sequence | MLETIVNFLN ALLWGKLLVY GLVGAGLYFT LRLVFIQITH FKHSLKVMTM SRQGCESGLS
SFQVFCTSMA ARVGAGNMAG VAVAIGAAGP GAVFWMWLIA ILGMATAMVE STLAQVYKVR
DTNGQFRGGP SYYMEKGLGQ RWMGVLFAFF LIIAFGLVFN AVQANTITGA MERVFGFNPT
YVGIGLVLAS GFVIVGGLRK VARVSEFIVP IMALAYILIA FIIVLFNLEQ LPAVISLIVK
SAFGWQEAAA GGVAYTVAQA MQAGIARGLF SNEAGMGSAA NVAASASPNP NHPASQGFVQ
MMGVFVDTIV ICTATAAIIL LSGDIGSSED GIRLTINAMS NHVGDWGGAF IAIAIFLFCF
TSIIANYSYA ETNVMFLTGN STKALPLFRL CVLGMVMFGA VAKISLVWNL ADVSMGLMAT
VNIIALLLLS GLAIRVINDY CEQLKSGKMP EFDRSKFPEL MEQLDDGIWQ DNSANEQAKT
RTESALSR
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