Gene Shewmr4_2960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2960 
SymbolrpsT 
ID4253531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3536259 
End bp3536525 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content46% 
IMG OID638119596 
Product30S ribosomal protein S20 
Protein accessionYP_735088 
Protein GI113971295 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0268] Ribosomal protein S20 
TIGRFAM ID[TIGR00029] ribosomal protein S20 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000020022 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.711019 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCTAATA GCAAGTCTGC AAAGAAGCGC GCGCTTCAAT CTGAAAAGCG TCGTCAGCAC 
AACGCCAGCC GTCGCTCAAT GTTACGTACA TACGTTAAAA AAGTTATCGC TGCTATCAAA
GCTGGCGATC ACAAAACAGC AACCGAAGCT TTCGCTGCTG CACAACCAAT CGTTGACCGT
ATGGCGACTA AAGGCCTTAT TCACAAGAAT AAAGCTGCCC GTCATAAGGC TCGTTTGAAT
GCTAAGATCA AAGCACTAGC TGCTTAA
 
Protein sequence
MANSKSAKKR ALQSEKRRQH NASRRSMLRT YVKKVIAAIK AGDHKTATEA FAAAQPIVDR 
MATKGLIHKN KAARHKARLN AKIKALAA