Gene Shewmr4_2955 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2955 
Symbol 
ID4253526 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3529647 
End bp3530069 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content50% 
IMG OID638119591 
Productpeptidylprolyl isomerase, FKBP-type 
Protein accessionYP_735083 
Protein GI113971290 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0498263 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.329752 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGTGA CACGTTCGTT ATTGTGCCAT ATGAATATTG TGCTTGAAGA TGGTTCGACC 
GCCGATAGCA CTAAAGCCTC GGGTAAGCCA GCACGCCTTA ATATCGGCGA TGGTACTTTA
AGCCCTGCAT TTGAAGCGCA ACTTGTTTCC TTGAATCTAG GCGATAAGCA CAGCTTTACG
CTTGAAGCGG TCGATGCCTT TGGTGAGTCA AATCCCGATG CGATTCATTA TATGGATAGA
ACCCGCTTCC CAGCCGATAT GGAGCTTGAA GTTGGTGTTA TCGTCAGTTT CGCAGGCCCT
GGCGGCAGTG AGATCCCCGG AATCGTGCGT GAGGTTGCTG GCGATTCGAT TACGGTCGAT
CTCAATCACC CTCTAGCGGG ACGCAAAGTG ACATTTGAAC TCGACGTGGT GAAGGTACTG
TAA
 
Protein sequence
MTVTRSLLCH MNIVLEDGST ADSTKASGKP ARLNIGDGTL SPAFEAQLVS LNLGDKHSFT 
LEAVDAFGES NPDAIHYMDR TRFPADMELE VGVIVSFAGP GGSEIPGIVR EVAGDSITVD
LNHPLAGRKV TFELDVVKVL