Gene Shewmr4_2945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2945 
Symbol 
ID4253516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3520389 
End bp3520727 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content43% 
IMG OID638119581 
Productnitrogen regulatory protein P-II 
Protein accessionYP_735073 
Protein GI113971280 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0347] Nitrogen regulatory protein PII 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0214654 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.391037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAG TTGAAGCGAT TATTAAGCCT TTTAAATTGG ATGATGTACG CGAGTCACTT 
GCTGAGATAG GTATCACGGG GATGACAGTG CTTGAAGTCA AAGGCTTCGG CCGTCAAAAA
GGGCACACCG AGCTTTACCG TGGTGCTGAG TATATGGTCG ACTTTTTACC TAAAGTGAAA
ATTGAACTCG TGATTCAAGA TGATTTAGTC GACCAAGCGA TTGATGTTAT TGTGGAAACA
GCTCGTACAG GTAAAATCGG CGATGGTAAG ATTTTCGTAA CCGATGTAGA ACGTGTTATC
CGCATTCGAA CTGGTGAAGA AAACGAAGAA GCGGTGTGA
 
Protein sequence
MKKVEAIIKP FKLDDVRESL AEIGITGMTV LEVKGFGRQK GHTELYRGAE YMVDFLPKVK 
IELVIQDDLV DQAIDVIVET ARTGKIGDGK IFVTDVERVI RIRTGEENEE AV