Gene Shewmr4_2930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2930 
Symbol 
ID4253501 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3498728 
End bp3499450 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content51% 
IMG OID638119566 
Producthypothetical protein 
Protein accessionYP_735058 
Protein GI113971265 
COG category 
COG ID 
TIGRFAM ID[TIGR02001] conserved hypothetical protein, proteobacterial 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000617689 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAACA ACCTAAATAA AAAGCGGCTG GCACAAGTTG TTGGGCTCGC GCTAACGACC 
AGCTTATTCT CCGGCATTAC CGCCGCAGAA GTGTCGGGGG AAATTGGCGT AACCAACGAT
TATCGCTTCC GTGGCATCTC GCAAACTGCG GGCGATCCCG CGGTTCAAGG CGGTGTCGAT
TGGAGTTTTG AGTCAGGATT TTCGGTCGGC GCCTGGGCCA GTAATGTCGA CTTTGACGAG
CCAGGTTACA ACGGTCCAGA TATCGAGTAT GACTTTTATG TTGCCTACGG CGGTGACATC
AATGATAACG TCAGCTACGA CGTGACCCTC AACCGCTATA ACTATTCGGG CGAGAGTGAT
CTCGGCTATT TCGAAGTAAC AGCTGGTGTC GAGTTTAGCG GCTTTCGCGT AGCCTATTGG
TACACCAATG ATTACGGTGG CAGCGATTTA GATTATCACT ACGGCGAAAT CAATTACTCC
TATGAGTTTG TTGAAAACTG GAGCCTCGAT CTGCATTACG GCTACAACGT AGGCGATGCC
TTAGACGATG GTGAAGGCTT TGATAGCTAC TCGGATTATT CCGTCGGCGT ATCCACCGAA
TTTATGGGAT TTGGCCTGTC GCTCGCTTGG CTTGGCACTG ACTTGAGCGG CGATCAGAAA
GTCTCCGACG GTGTGTGGGA AAACGACGAT ACCGTTTTAG CAACAGTCAG CTACGCCTTC
TAA
 
Protein sequence
MNNNLNKKRL AQVVGLALTT SLFSGITAAE VSGEIGVTND YRFRGISQTA GDPAVQGGVD 
WSFESGFSVG AWASNVDFDE PGYNGPDIEY DFYVAYGGDI NDNVSYDVTL NRYNYSGESD
LGYFEVTAGV EFSGFRVAYW YTNDYGGSDL DYHYGEINYS YEFVENWSLD LHYGYNVGDA
LDDGEGFDSY SDYSVGVSTE FMGFGLSLAW LGTDLSGDQK VSDGVWENDD TVLATVSYAF