Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2930 |
Symbol | |
ID | 4253501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3498728 |
End bp | 3499450 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 638119566 |
Product | hypothetical protein |
Protein accession | YP_735058 |
Protein GI | 113971265 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02001] conserved hypothetical protein, proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000617689 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATAACA ACCTAAATAA AAAGCGGCTG GCACAAGTTG TTGGGCTCGC GCTAACGACC AGCTTATTCT CCGGCATTAC CGCCGCAGAA GTGTCGGGGG AAATTGGCGT AACCAACGAT TATCGCTTCC GTGGCATCTC GCAAACTGCG GGCGATCCCG CGGTTCAAGG CGGTGTCGAT TGGAGTTTTG AGTCAGGATT TTCGGTCGGC GCCTGGGCCA GTAATGTCGA CTTTGACGAG CCAGGTTACA ACGGTCCAGA TATCGAGTAT GACTTTTATG TTGCCTACGG CGGTGACATC AATGATAACG TCAGCTACGA CGTGACCCTC AACCGCTATA ACTATTCGGG CGAGAGTGAT CTCGGCTATT TCGAAGTAAC AGCTGGTGTC GAGTTTAGCG GCTTTCGCGT AGCCTATTGG TACACCAATG ATTACGGTGG CAGCGATTTA GATTATCACT ACGGCGAAAT CAATTACTCC TATGAGTTTG TTGAAAACTG GAGCCTCGAT CTGCATTACG GCTACAACGT AGGCGATGCC TTAGACGATG GTGAAGGCTT TGATAGCTAC TCGGATTATT CCGTCGGCGT ATCCACCGAA TTTATGGGAT TTGGCCTGTC GCTCGCTTGG CTTGGCACTG ACTTGAGCGG CGATCAGAAA GTCTCCGACG GTGTGTGGGA AAACGACGAT ACCGTTTTAG CAACAGTCAG CTACGCCTTC TAA
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Protein sequence | MNNNLNKKRL AQVVGLALTT SLFSGITAAE VSGEIGVTND YRFRGISQTA GDPAVQGGVD WSFESGFSVG AWASNVDFDE PGYNGPDIEY DFYVAYGGDI NDNVSYDVTL NRYNYSGESD LGYFEVTAGV EFSGFRVAYW YTNDYGGSDL DYHYGEINYS YEFVENWSLD LHYGYNVGDA LDDGEGFDSY SDYSVGVSTE FMGFGLSLAW LGTDLSGDQK VSDGVWENDD TVLATVSYAF
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