| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2928 |
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| Symbol | |
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| ID | 4253499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | + |
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| Start bp | 3496671 |
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| End bp | 3498161 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638119564 |
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| Product | methylmalonate-semialdehyde dehydrogenase [acylating] |
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| Protein accession | YP_735056 |
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| Protein GI | 113971263 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01722] methylmalonic acid semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0250419 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACAA TGACTCATTA TGTGAATGGC GAGCACTCCG CCGCCAGTAC AAGAAGCCAA
GAGATTTTCG AACCCGCTAC GGGAGAATGC CGAGGTCAGG TCTCCCTCGC GAGTCGCGAC
GAAGTCTCCG CCGCCATTGC TATCGCCAAA TCGGCCTTCG ACACTTGGTC ACAGGTAACG
CCCCTCAATC GTGCTCGTGT GTTATTTAAG TTTAAAGCGC TGGTCGAGCA ACATATGGAT
GAGTTGGCGC GACTGATTAC CTTAGAGCAC GGCAAAGTGC TCGATGATGC GCGGGGAGAA
CTCATCCGCG GCCTCGAAGT CGTCGAATTT GCCTGTGGTA TCCCACACTT GCTCAAAGGG
GAGCATACGG AGCAGGTCGG CGGTGGCGTA GACGCTTGGT CAGTCAATCA AGCTTTAGGT
GTTGTCGCAG GCATAGCGCC CTTTAACTTC CCCGTGATGG TTCCCATGTG GATGTTCCCA
ATCGCGATTG CCTGCGGTAA CACCTTTATT ATGAAACCCT CGGAAAAAGA CCCAAGCGCG
ATAATGCGTA TTGCGGAATT ACTCACCGAA GCTGGTCTCC CTGCGGGGGT ATTTAACGTG
GTCAACGGTG ATAAAGAGGC CGTCGATACC CTGCTCAGCC ATGAAGATAT TCAAGCCGTC
AGCTTTGTTG GCTCCACCCC GATAGCCGAA TACATTTACA GCACCGCATC TAAACACGGT
AAACGGGTGC AAGCCTTAGG CGGCGCGAAA AACCATATGC TACTGATGCC GGATGCGGAT
TTAGATCAAG CGGTGAGTGC CCTCATGGGC GCCGCCTATG GCAGCGCCGG CGAGCGTTGT
ATGGCCATTT CGGTGGTATT GGCCGTAGGA GATGTGGGCG ACAAGCTGGT CGATAGATTA
TTACCGCAAA TTCAACAGTT AAAAGTGGGC AATGGCCTCA CCCCAGAGAT GGAAATGGGA
CCGTTGATCT CCCGCCAGCA CCTCGCCAAA GTCACGGAAT TTGTCGACGC TGGCGTCCAA
GAAGGCGCGA CCTTAGTGGT AGATGGTCGT CAGTTAAGCG TGGCCGATCA TCAGCAGGGT
TACTTCTTAG GGGCCTGTTT ATTCGATAAC GTCACCCCTG AGATGCGTAT TTACCGCGAA
GAAATCTTCG GCCCAGTGCT GTCGATTGTG CGGGTTAAAG ACTATGCCAG CGCACTGGCG
CTTATCAACC AACATGAATT TGGCAATGGC ACCGCCATCT TTACCCAAAG CGGTGAGGCT
GCCAGACATT TTTGCCACCA TGTGCAGGTC GGTATGGTAG GGGTTAACGT GCCCATCCCA
GTGCCTATGG CCTTCCACTC CTTCGGTGGC TGGAAACGTT CGCTCTTTGG TCCCCTGCAT
ATGCATGGTC CTGATGGGGT ACGTTTTTAT ACCAAACGTA AAGCCATCAC GGCACGCTGG
CCCGTAGGCA AACAGACTCA GGCCGAGTTT GTTATGCCCA CCATGAAATA A
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| Protein sequence | MLTMTHYVNG EHSAASTRSQ EIFEPATGEC RGQVSLASRD EVSAAIAIAK SAFDTWSQVT
PLNRARVLFK FKALVEQHMD ELARLITLEH GKVLDDARGE LIRGLEVVEF ACGIPHLLKG
EHTEQVGGGV DAWSVNQALG VVAGIAPFNF PVMVPMWMFP IAIACGNTFI MKPSEKDPSA
IMRIAELLTE AGLPAGVFNV VNGDKEAVDT LLSHEDIQAV SFVGSTPIAE YIYSTASKHG
KRVQALGGAK NHMLLMPDAD LDQAVSALMG AAYGSAGERC MAISVVLAVG DVGDKLVDRL
LPQIQQLKVG NGLTPEMEMG PLISRQHLAK VTEFVDAGVQ EGATLVVDGR QLSVADHQQG
YFLGACLFDN VTPEMRIYRE EIFGPVLSIV RVKDYASALA LINQHEFGNG TAIFTQSGEA
ARHFCHHVQV GMVGVNVPIP VPMAFHSFGG WKRSLFGPLH MHGPDGVRFY TKRKAITARW
PVGKQTQAEF VMPTMK
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