Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2920 |
Symbol | |
ID | 4253491 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3488055 |
End bp | 3488816 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 638119556 |
Product | peptidase C26 |
Protein accession | YP_735048 |
Protein GI | 113971255 |
COG category | [R] General function prediction only |
COG ID | [COG2071] Predicted glutamine amidotransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.129807 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGTCG AGTTGCCCCT TATTGGTGTT ATTGCGTGTA ATCAACAATT GGGATCACAT CCCTTTAATA TTGTTGGTGA AAAATACCTC TTAGGTGTAG TGAATGGTGC TAAGGGCTGG CCCTTAGTGA TCCCCTCATT AGGTGCTGAA CAACCTATTG AGGCGATTCT GGCAAGTCTC GATGGCATTC TCTTTACTGG TTCGCCTTCG AATGTTGAAC CCCATCTCTA TGCGGGTGAA CCGAGTGAAG TCGGTACTCA CCACGATCCC AAACGCGATG CTACCACCTT ACCGCTGATC CGTGCGGCCA TTGCGGCGGG TGTGCCTGTG CTTGGGATTT GTCGTGGCTT TCAAGAGATG AACGTCGCTT TTGGTGGCAG TCTGCATCAG AAGTTGCACG AAGTGGGCGG TTTTATTGAA CACAGAGAAG ATAAAGAGGC CTCGTTAGAG GTGCAATATG GGCCATCCCA CAGTATTACT GTGGAGCCTG GGGGGGTCAT TTACGAGGCC TGGGGCCGTA ACTCGGCAGA GGTAAACTCT GTACATACCC AGGGCGTGGA GCGTCTTGGG ATTGGGTTGC GGCCAGAAGC TTATGCTCCA GATGGTCTAG TGGAGGCCTT CTCCGTTATA GACGCAAATG AATTTGCCCT CGGTGTGCAA TGGCATCCTG AATGGAAGGT GAGCGAAAAC CCATTTTTCC TCTCTATATT CAATGCCTTT GGTGATGCAT GCCGTCGTAG GGCTACAACT CGAGTGAAAT AA
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Protein sequence | MSVELPLIGV IACNQQLGSH PFNIVGEKYL LGVVNGAKGW PLVIPSLGAE QPIEAILASL DGILFTGSPS NVEPHLYAGE PSEVGTHHDP KRDATTLPLI RAAIAAGVPV LGICRGFQEM NVAFGGSLHQ KLHEVGGFIE HREDKEASLE VQYGPSHSIT VEPGGVIYEA WGRNSAEVNS VHTQGVERLG IGLRPEAYAP DGLVEAFSVI DANEFALGVQ WHPEWKVSEN PFFLSIFNAF GDACRRRATT RVK
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