| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2913 |
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| Symbol | |
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| ID | 4253484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. MR-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008321 |
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| Strand | - |
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| Start bp | 3478901 |
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| End bp | 3480349 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 638119549 |
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| Product | succinate semialdehyde dehydrogenase |
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| Protein accession | YP_735041 |
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| Protein GI | 113971248 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0320472 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.673658 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTGTTAA AAGACCCGAG TCTGCTGCGT CAGCAATGTT ATATCAATGG TCAGTGGTGC
GATGCACAGT CAAAAGAAAC TGTCGCTATC GCCAATCCCG CGACGGGCGT GGTGATCGCC
AGTGTCCCTG TGATGGGGCA AGCCGAAACT CAAGCGGCAA TTGCGGCAGC CGAAGTGGCC
TTGCCCGCAT GGCGGGCGCT TACCGCAAAA GAGCGTGGTG CCAAGCTGCG CCGCTGGTTT
GAATTACTCA ATGAAAACAG TGATGACTTA GCGCTAATGA TGACCAGTGA GCAGGGTAAA
CCCCTCGCCG AAGCTAAGGG AGAAGTCACC TACGCCGCCT CCTTTATCGA ATGGTTCGCC
GAAGAGGCGA AGCGCGTCTA TGGCGATACG ATTCCTGGGC ATCAGGGCGA TAAACGCATC
ATGGTGATCA AGCAGCCCGT GGGCGTGACT GCGGCCATTA CTCCTTGGAA CTTCCCTGCG
GCGATGATCA CCCGCAAAGC CGCGCCAGCA CTGGCGGCAG GTTGCACTAT GGTGGTGAAA
CCTGCGCCGC AAACGCCTTT TACCGCATTA GCCTTAGCCG TGCTTGCCGA GCGCGCCGGG
ATCCCTGCAG GAGTGTTCAG CGTGATCACT GGTGATGCTA TCGGCATTGG TAATGAGATG
TGTAGCAACC CAACTGTGCG TAAGTTGTCT TTCACTGGCT CGACCCAAGT GGGCATTAAG
TTAATGGAGC AATGCGCGCC GACTCTGAAA AAATTATCTT TAGAATTAGG CGGTAACGCG
CCATTTATCG TATTCGACGA TGCCAATATC GATGCGGCGG TTGAAGGCGC CATGATCGCT
AAGTATCGCA ATGCGGGGCA AACCTGTGTC TGTGCTAACC GTATTTATGT TCAGGCGGGC
GTGTATGACG AATTTGCCCG CAAGCTCAGT ATTGCCGTGG GCAAATTAAA GGTGGGTGAG
GGGATTACTG AAGGCGTCAC TACGGGCCCC CTCATTAATC GCGCGGCGGT CGAAAAAGTC
CAGAGCCATC TTGAGGATGC GCTCAGCAAA GGGGCATCGG TGGTTGCGGG AGGCAAGCCC
CATAGCTTAG GTGGCAACTT CTTCGAGCCC ACGGTACTGA CACATGTCGA TAGCAGTATG
CGTGTCGCCC GTGAAGAAAC CTTTGGCCCA CTGGCGCCGC TGTTTAAGTT TACCGATGTG
GACGATGTGA TTAAGCAAGC CAATGATACC GAGTTTGGCT TGGCGGCTTA TTTTTATGGC
CGTGATATCT CACTCGTGTG GAAAGTGGCC GAGGCATTGG AATACGGCAT GGTGGGCGTC
AACACTGGGT TGATTTCCAC CGAAGTCGCG CCGTTTGGCG GAATGAAATC CTCAGGGCTT
GGCCGAGAAG GCTCTAAGTT CGGCATCGAA GAATATTTAG AAATCAAATA TATCTGTATG
TCTGTTTAA
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| Protein sequence | MLLKDPSLLR QQCYINGQWC DAQSKETVAI ANPATGVVIA SVPVMGQAET QAAIAAAEVA
LPAWRALTAK ERGAKLRRWF ELLNENSDDL ALMMTSEQGK PLAEAKGEVT YAASFIEWFA
EEAKRVYGDT IPGHQGDKRI MVIKQPVGVT AAITPWNFPA AMITRKAAPA LAAGCTMVVK
PAPQTPFTAL ALAVLAERAG IPAGVFSVIT GDAIGIGNEM CSNPTVRKLS FTGSTQVGIK
LMEQCAPTLK KLSLELGGNA PFIVFDDANI DAAVEGAMIA KYRNAGQTCV CANRIYVQAG
VYDEFARKLS IAVGKLKVGE GITEGVTTGP LINRAAVEKV QSHLEDALSK GASVVAGGKP
HSLGGNFFEP TVLTHVDSSM RVAREETFGP LAPLFKFTDV DDVIKQANDT EFGLAAYFYG
RDISLVWKVA EALEYGMVGV NTGLISTEVA PFGGMKSSGL GREGSKFGIE EYLEIKYICM
SV
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