| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewmr4_2899 |
|---|
| Symbol | |
|---|
| ID | 4253470 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. MR-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008321 |
|---|
| Strand | - |
|---|
| Start bp | 3462011 |
|---|
| End bp | 3462850 |
|---|
| Gene Length | 840 bp |
|---|
| Protein Length | 279 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 638119534 |
|---|
| Product | rRNA (guanine-N(1)-)-methyltransferase |
|---|
| Protein accession | YP_735027 |
|---|
| Protein GI | 113971234 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.00000000719078 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | unclonable |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.00146676 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGACCTTC AATTTCAATG TCCTACCTGT GGTTCGGCAC TGATGCAGCA TCAGGCATCC
CAAGGTTTTT ACTGTGCGAA TAAGCATCAT TTTGATAAAA ACGAGGCGGG ATATTGGATT
TTTACTAAAC CGGCACGGCA AAAGCCGACT GGCGACTCTC GCCAACAAGT AAGGGCGAAG
CGATTCCTGC TTGAGTCAGG GATTTTTGCA CCTTTGATCG AAAAAATGGG CGCGATGATT
GCTACTCATC TCAAGGCAGA TGATTGCCTG TTGGATTACG AGTGCGCTGA GGGCTTCTAC
TTGCGCGCTT TAGCTTCGGT GCTACCTAGG CTTACAAATG GATTAAACGT CCAGTACAGT
GGCGTAGCGG ACGCAGAAAA TACTATTTTT GCTGCGGCCA AAGCGCAAAC CCCTGCAACA
CTGTGCTTAA GCACCTCAAA AGTGCTGCCT TTTGCCGATA ATTGTATCGA TGTGATCACA
GTGATCGATA AGCCGATGAA GGGGAAAGAA TGTGTGCGAG TGCTCAAGGA GCAGGGATTC
ATCTTACAGG TGATCCCCGG CGCTCGTCAT TTGTGGCAAA TAAGGGAGTG TATTTATCCG
GAACTGACTG AAAAAACTGT TCAAATAAAT TTACCTTCAG CATTAATAGT CAAAGACCAA
CACCGATTGC AATTCAGCTT GTCGGTAACG GGCGAACAAG CTTTGGTCTT ACTCGATATG
ACACCCTATG CGTGGCGTGC CTCTGAGCAG GTCAAACGGC TAATTCGGAC GCGAACGTTC
GATGCTCTCG AAATTGACTT TGTTTTAGTC TTGGCGCAAA AGTCTTTAAT TGGGTCTTAA
|
|---|
| Protein sequence | MDLQFQCPTC GSALMQHQAS QGFYCANKHH FDKNEAGYWI FTKPARQKPT GDSRQQVRAK
RFLLESGIFA PLIEKMGAMI ATHLKADDCL LDYECAEGFY LRALASVLPR LTNGLNVQYS
GVADAENTIF AAAKAQTPAT LCLSTSKVLP FADNCIDVIT VIDKPMKGKE CVRVLKEQGF
ILQVIPGARH LWQIRECIYP ELTEKTVQIN LPSALIVKDQ HRLQFSLSVT GEQALVLLDM
TPYAWRASEQ VKRLIRTRTF DALEIDFVLV LAQKSLIGS
|
|---|
| |