Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2899 |
Symbol | |
ID | 4253470 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | - |
Start bp | 3462011 |
End bp | 3462850 |
Gene Length | 840 bp |
Protein Length | 279 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 638119534 |
Product | rRNA (guanine-N(1)-)-methyltransferase |
Protein accession | YP_735027 |
Protein GI | 113971234 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000719078 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.00146676 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGACCTTC AATTTCAATG TCCTACCTGT GGTTCGGCAC TGATGCAGCA TCAGGCATCC CAAGGTTTTT ACTGTGCGAA TAAGCATCAT TTTGATAAAA ACGAGGCGGG ATATTGGATT TTTACTAAAC CGGCACGGCA AAAGCCGACT GGCGACTCTC GCCAACAAGT AAGGGCGAAG CGATTCCTGC TTGAGTCAGG GATTTTTGCA CCTTTGATCG AAAAAATGGG CGCGATGATT GCTACTCATC TCAAGGCAGA TGATTGCCTG TTGGATTACG AGTGCGCTGA GGGCTTCTAC TTGCGCGCTT TAGCTTCGGT GCTACCTAGG CTTACAAATG GATTAAACGT CCAGTACAGT GGCGTAGCGG ACGCAGAAAA TACTATTTTT GCTGCGGCCA AAGCGCAAAC CCCTGCAACA CTGTGCTTAA GCACCTCAAA AGTGCTGCCT TTTGCCGATA ATTGTATCGA TGTGATCACA GTGATCGATA AGCCGATGAA GGGGAAAGAA TGTGTGCGAG TGCTCAAGGA GCAGGGATTC ATCTTACAGG TGATCCCCGG CGCTCGTCAT TTGTGGCAAA TAAGGGAGTG TATTTATCCG GAACTGACTG AAAAAACTGT TCAAATAAAT TTACCTTCAG CATTAATAGT CAAAGACCAA CACCGATTGC AATTCAGCTT GTCGGTAACG GGCGAACAAG CTTTGGTCTT ACTCGATATG ACACCCTATG CGTGGCGTGC CTCTGAGCAG GTCAAACGGC TAATTCGGAC GCGAACGTTC GATGCTCTCG AAATTGACTT TGTTTTAGTC TTGGCGCAAA AGTCTTTAAT TGGGTCTTAA
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Protein sequence | MDLQFQCPTC GSALMQHQAS QGFYCANKHH FDKNEAGYWI FTKPARQKPT GDSRQQVRAK RFLLESGIFA PLIEKMGAMI ATHLKADDCL LDYECAEGFY LRALASVLPR LTNGLNVQYS GVADAENTIF AAAKAQTPAT LCLSTSKVLP FADNCIDVIT VIDKPMKGKE CVRVLKEQGF ILQVIPGARH LWQIRECIYP ELTEKTVQIN LPSALIVKDQ HRLQFSLSVT GEQALVLLDM TPYAWRASEQ VKRLIRTRTF DALEIDFVLV LAQKSLIGS
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