Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewmr4_2892 |
Symbol | |
ID | 4253463 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. MR-4 |
Kingdom | Bacteria |
Replicon accession | NC_008321 |
Strand | + |
Start bp | 3452173 |
End bp | 3453192 |
Gene Length | 1020 bp |
Protein Length | 339 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 638119527 |
Product | aspartate carbamoyltransferase |
Protein accession | YP_735020 |
Protein GI | 113971227 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0540] Aspartate carbamoyltransferase, catalytic chain |
TIGRFAM ID | [TIGR00670] aspartate carbamoyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00000646707 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACCAGT TCGAAGGATC TCATATCCTC TCCGTAAACC AGTTAGATCT TGATTCAATC CAAACTATTT TTAATGTTGC CAATCGTATG ATGCCCTATG CACTTCGTGA GAAGCGCACT AAGGTGCTCG AAGGCGCCAT TTTAGGTAAC CTGTTTTTCG AGCCAAGTAC CCGTACCCGC GTGAGTTTTG GCTGTGCCTT TAACTTACTC GGCGGCCATG TGCGTGAAAC CACAGGCATG GCTTCATCGT CCTTGTCTAA GGGCGAGTCC CTGTACGATA CCGCACGTGT ACTCTCGACC TATTCCGATG TGATTGCGAT GCGCCACCCA GACTCTTATT CAGTGAAAGA GTTTGCTGAA GGTAGCCGCG TGCCGGTGAT CAACGGTGGT GATGGTTCGA ACGAGCACCC GACTCAAGCG CTGCTCGATC TGTTCACCAT TCAAAAAGAA TTAAGCCATG CTGGCCGTGG TATCGATGGC ATGCATATCG CTATGGTGGG CGACTTAAAA TTTGGCCGAA CCGTTCATTC CCTGTCGCGC CTGCTGTGCA TGTACAAGAA CATCAGCTTC ACGCTGATTT CGCCTGCTGA GTTAGCAATG CCTGACTATG TGATCTCCGA CATTGAAAAT GCTGGCCATA GCATCAAAAT AACAGACCAG CTTGAAGGCC ACTTAGATAA AGCCGACATT CTTTATCTAA CCCGCATTCA AGAAGAGCGC TTCCCATCCC AGGAAGAAGC GAACAAATAC CGCGGTAAGT TCCGTTTGAA TCGCAGTATT TATACCCAAC ATTGCAAATC TAACACTGTG ATCATGCACC CGCTGCCACG GGATTCGCGT GCGCAAGCTA ATGAGTTAGA TAATGATTTG AACAGCCATC CTAATCTCGC TATCTTCAGA CAGGCGGACA ATGGACTGCT AATTCGTATG GCACTGTTTG CATTGACACT CGGGGTTGAC TCGCAACTCG AAAAATATGA GTGTCCCGTT AATTGGTATT CACGTAAAGC CGATCGCTAA
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Protein sequence | MNQFEGSHIL SVNQLDLDSI QTIFNVANRM MPYALREKRT KVLEGAILGN LFFEPSTRTR VSFGCAFNLL GGHVRETTGM ASSSLSKGES LYDTARVLST YSDVIAMRHP DSYSVKEFAE GSRVPVINGG DGSNEHPTQA LLDLFTIQKE LSHAGRGIDG MHIAMVGDLK FGRTVHSLSR LLCMYKNISF TLISPAELAM PDYVISDIEN AGHSIKITDQ LEGHLDKADI LYLTRIQEER FPSQEEANKY RGKFRLNRSI YTQHCKSNTV IMHPLPRDSR AQANELDNDL NSHPNLAIFR QADNGLLIRM ALFALTLGVD SQLEKYECPV NWYSRKADR
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