Gene Shewmr4_2889 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewmr4_2889 
Symbol 
ID4253460 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. MR-4 
KingdomBacteria 
Replicon accessionNC_008321 
Strand
Start bp3449034 
End bp3449384 
Gene Length351 bp 
Protein Length116 aa 
Translation table11 
GC content48% 
IMG OID638119524 
Productiron-sulfur cluster insertion protein ErpA 
Protein accessionYP_735017 
Protein GI113971224 
COG category[S] Function unknown 
COG ID[COG0316] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00049] Iron-sulfur cluster assembly accessory protein 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.113097 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000819699 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACTGATC AAGCTGACGC AGCAATGCCT ATCAAATTTA CCGATGCGGC AGCCGCTAAG 
GTAAAGGGCT TGTTGGAAGA AGAGCAAAAT CCTGCACTTA AGCTACGTGT GTACGTGACG
GGTGGTGGTT GTTCTGGATT TCAGTACGGC TTTACCTTTG ATGAAAAGGT CAACGAAGGC
GACTTCACCG TTGAGAAGCA AGGCGTCCAA TTGGTCGTCG ATCCAATGAG CTTACAATAC
CTCGTTGGCG GTGAAGTGGA TTACACTTCT GGCCTCGAAG GTTCGCGTTT CTTTGTGAAG
AACCCGAATG CGACAACCAC CTGTGGTTGT GGTGCAAGTT TCTCTGTATA A
 
Protein sequence
MTDQADAAMP IKFTDAAAAK VKGLLEEEQN PALKLRVYVT GGGCSGFQYG FTFDEKVNEG 
DFTVEKQGVQ LVVDPMSLQY LVGGEVDYTS GLEGSRFFVK NPNATTTCGC GASFSV